EST details — SGN-E371654

Search information 
Request: 371654Match: SGN-E371654
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C178526Clone name: TUS-29-G4
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C178526 is on microarray TOM1 spot ID 1-1-5.3.4.14 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C72164 [cLER-1-F6] Trace: SGN-T91981 EST: SGN-E280427 Direction: 5' Facility: TIGR
Clone: SGN-C178526 [TUS-29-G4] Trace: SGN-T183984 EST: SGN-E371655 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E371654Length: 708 bp (902 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E371654 [] (trimmed) CAAACACACTTTTATAAATAGACGCAACAGGAACAGAAACCAACAACATGACACAATTCAAAGTGCAGAAACATAAAAGGCTTCTGGTGGAACAC
CAAAAGGCAAGACTAGTTGAGAAATTGCACACAGACGTTGCAAATCCCAACAGACACAAGTTTGGACGTATAAGTCCATTATTCTGAGAAAACAA
CAGACACTGAAATAAAAACAACAATACGACCCTCAAGACAACACTACTCCTTTCCTTCTTTCTCTTCCTCCTTCCAGCAGCCCTTCAGAACGGAC
TTGGGAGATTCACAGTAAGGAGTTCTAGTGAACTTCTGGTAGACAATGGAACCGCCTTTGCCAAACTCTTCTGGACTCCACTCAGCAAGAGAGTA
GCCCTTAACATCAACAGAGCAAACATGCTCCAGTAACTTGGTAGCAACATCAGCATGCAGAGCAATAGAGAACTCAGCTGGCTCAAAACATGCAA
GCACCCTCTCAACCAGGGGACCCAACTCATTGGTTTTAGGATCATATCCAACAGATTCAAAGCTGGCATAGCTAAAGCCGTCCTCCGGGGTAATG
TGAATGGTTGAAACAGCAGCTCCTTCAATAGAATTCATAGAATAACCACAGGGTTCAAACTCAAAATCACATATCTTAGACTTGGGGAGGATCTT
CCTGATGCCCAGATCTAACAGTCATGTGAGCAGCCGAACTTTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E371654] SGN-U580064 Tomato 200607 Build 2 541 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T183983 [Download][View] Facility Assigned ID: FA0AAD17BD02FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.965 Expected Error Rate: 0.0073 Quality Trim Threshold: 14.5