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EST details — SGN-E371668

Search information 
Request: 371668Match: SGN-E371668
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C178584Clone name: TUS-29-I14
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C178584 is on microarray TOM1 spot ID 1-1-3.1.4.19 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C72239 [cLER-1-J16] Trace: SGN-T92198 EST: SGN-E280644 Direction: 5' Facility: TIGR
Clone: SGN-C178584 [TUS-29-I14] Trace: SGN-T183998 EST: SGN-E371669 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E371668Length: 688 bp (896 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E371668 [] (trimmed) GATTAACTTTTTATCTACATTGTATGAATAGAATGTTGATTTCAGAATGCTACAAAACCAATTGTTTGTCGTGTGAAGACACCATAAAGGAGTAA
AAAAGAATGCATATTTCAACACTAGCCGAAAAAAAAAGAAAGAATAGCACAGTGATTTACAATGTTAATTACAAGTCAGATCTCTCTGTGAAGAA
ACGCTTTTCATGGGCAATTATTTTGGTAATGAGCCATTGAGAACTCAACTCTTATAGCTGCCTTGGGAATAATTGAAGAAATCTGAACTGTACTC
TTGACTTCCAAATGCCATCTTTTGAAACATTCTTATCTGTGCAGATTGTTCCCTTGACTCAAAAATTCCACTTTGTCCAGGTTTCACTCCATTGG
ACAGATCTGACAATTCATCCATGGAATCTAGAGCTCTAACCACCTGACTCATCCGTGGCCTCTTAGAGCCTGAATGACGCACGCAAGCTGCAGCT
GCTTCAATCATCCGGAACATCTCACCCGCAACAAAGTTGTTTCCAAGCCTAGGATCTACTACGTCTTCAAAATTTTCAGTCTCAAGTGCTTGAGC
AAGCAAAGGTCGAGCCCATTCAACCAGGCTTTCATCACCTAAGGGCTGAGACTGGTCAACAGGTTTCCGCCCCGTAATAAGCTCCAAAAGCACAA
CGCCAAATGAATAAACATCAGAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E371668] SGN-U598405 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T183997 [Download][View] Facility Assigned ID: FA0AAD17BE07FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.967 Expected Error Rate: 0.0033 Quality Trim Threshold: 14.5