EST details — SGN-E371672

Search information 
Request: 371672Match: SGN-E371672
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C178590Clone name: TUS-29-I20
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C178590 is on microarray TOM1 spot ID 1-1-5.1.3.2 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C72249 [cLER-1-J6] Trace: SGN-T91992 EST: SGN-E280438 Direction: 5' Facility: TIGR
Clone: SGN-C178590 [TUS-29-I20] Trace: SGN-T184002 EST: SGN-E371673 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E371672Length: 336 bp (879 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E371672 [] (trimmed) CGCGGTGACTCGGTCAGAGAGACATTGCAACTCAGTACCGAGTCCTATCCGGTGCTGGACCCGGCGAGTAGTGCTGTAAAAAGGGGTTGTTTCGA
TTTGGATCAGATCGGTAATGGAATCGAAATTTTCTAGATCGAGGAAGGTATTGGGTGCATAAGGCTTAGGGCAGATGAGATCGAGAGTGCAGTCA
AGCTCATCTTCAATGTGGAAGTATGGGTTTAGAAGTAGGGTTTTGGGGGTGAAAAATGAAGGAGAAGAAGAGTAGTCGATGATGTCAAATCTCCT
GAAGCGGCTCATTTTCGCTTGAATCTAGCTAAACCAAATGCTAAAAACTTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E371672] SGN-U585337 Tomato 200607 Build 2 25 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T184001 [Download][View] Facility Assigned ID: FA0AAD17BE10FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read -- flanking 5' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.954 Expected Error Rate: 0.0011 Quality Trim Threshold: 12.5