EST details — SGN-E371678

Search information 
Request: 371678Match: SGN-E371678
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C178640Clone name: TUS-29-K22
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C178640 is on microarray TOM1 spot ID 1-1-3.3.3.2 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C72311 [cLER-1-M5] Trace: SGN-T91875 EST: SGN-E280321 Direction: 5' Facility: TIGR
Clone: SGN-C72311 [cLER-1-M5] Trace: SGN-T91876 EST: SGN-E280322 Direction: 3' Facility: TIGR
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E371678Length: 438 bp (865 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E371678 [] (trimmed) CTGCAACTGGGGGCAGTGACGTGATGTTGAGGGAAATAAAACGTCCTCAAGGGGATCCAAAGGTTATGGCTGCTCAGTCAAGGGAACAGTATCTT
AAGTTAAAGAATAAATTGCAGCTCCTCACAGTTGGGATTGGTGGTGTTGGTGTGATTTCAGCTTATATCTCTTATTCTCCTGAAATAACAGTAAG
TTACACTGCTGGGTTGATTGGTTCTTTGATGTACATGCGTATGCTTGGAAACAGTGTGGATTCTATGCAGACAGATGGACCCATATCACTTATTA
ATGGAGCTGTTGGGCAGCCAACGCTATTGGTTCCTGTTGCTTATGATATGAGCTTACATTGGCGGAACGGAATCCTACTGCTAGAATAGGCCTTA
TTGCACCCTGTGTTGTTGCCCGTGCTACGACAATGTATGGCTTGCCACAATGATGCTC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E371678] SGN-U570784 Tomato 200607 Build 2 4 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T184007 [Download][View] Facility Assigned ID: FA0AAD17BF11RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.959 Expected Error Rate: 0.0120 Quality Trim Threshold: 14.5