EST details — SGN-E371700
Search information |
Request: 371700 | Match: SGN-E371700 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C178736 | Clone name: TUS-29-O22 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C178736 is on microarray TOM1 spot ID 1-1-3.3.3.3 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C70578 [cLER-15-E21] | Trace: SGN-T95119 | EST: SGN-E282599 | Direction: 5' | Facility: TIGR |
Clone: SGN-C178736 [TUS-29-O22] | Trace: SGN-T184028 | EST: SGN-E371699 | Direction: 3' | Facility: INRA |
Sequence |
Sequence Id: SGN-E371700 | Length: 737 bp (884 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E371700 [] (trimmed)
TGCCGACATGGCCTCAGCTTGTGCTTCATCCACCATTGCTGCTGTTGCTTTTTCTTCTCCAAGTTCGAGGAGAAATGGATCAATTGTAGGAACAA
CAAAAGCTTCATTCCTTGGAGGAAGAAGATTGAGAGTAAGCAAATACAGTACTACACCTACAGCACGAAGTGCAACTACAGTGTGCGTTGCTGCA
GACCCTGACAGACCCCTCTGGTTCCCTGGCAGCACCCCACCTCCATGGCTTGATGGCAGCCTTCCCGGAGACTTCGGTTTCGATCCTCTTGGTCT
AGCATCTGATCCAGAGAGCTTGAGATGGAACCAACAGGCAGAACTTGTACACTGCAGATGGGCAATGTTGGGAGCTGCAGGAATTTTCATTCCAG
AATTACTCACAAAAATTGGAATACTTAACACACCTTCATGGTACACTGCTGGTGAACAAGAATATTTCACGGACACAACGACTCTCTTCATCGTT
GAATTGGTACTTATTGGTTGGGCTGAGGGAAGAAGATGGGCAGATATCATCAAGCCTGGATGCGTTAACACGGATCCAATCTTCCCTAACAACAA
GCTCACGGAGACAGATGTTGGTTATCCAGGAGGTTTATGGTTTGATCCCTTGAGTTGGGGTTCGGGTTCACCTGCAAAGATAAAGGAGTTGAGGA
CAAAGGAGATTATGAACGGTAGACTTGCTATGTTAGCCGTTATGGGTGCATGGTTCCACACATTTACACTGG
CAAAAGCTTCATTCCTTGGAGGAAGAAGATTGAGAGTAAGCAAATACAGTACTACACCTACAGCACGAAGTGCAACTACAGTGTGCGTTGCTGCA
GACCCTGACAGACCCCTCTGGTTCCCTGGCAGCACCCCACCTCCATGGCTTGATGGCAGCCTTCCCGGAGACTTCGGTTTCGATCCTCTTGGTCT
AGCATCTGATCCAGAGAGCTTGAGATGGAACCAACAGGCAGAACTTGTACACTGCAGATGGGCAATGTTGGGAGCTGCAGGAATTTTCATTCCAG
AATTACTCACAAAAATTGGAATACTTAACACACCTTCATGGTACACTGCTGGTGAACAAGAATATTTCACGGACACAACGACTCTCTTCATCGTT
GAATTGGTACTTATTGGTTGGGCTGAGGGAAGAAGATGGGCAGATATCATCAAGCCTGGATGCGTTAACACGGATCCAATCTTCCCTAACAACAA
GCTCACGGAGACAGATGTTGGTTATCCAGGAGGTTTATGGTTTGATCCCTTGAGTTGGGGTTCGGGTTCACCTGCAAAGATAAAGGAGTTGAGGA
CAAAGGAGATTATGAACGGTAGACTTGCTATGTTAGCCGTTATGGGTGCATGGTTCCACACATTTACACTGG
Unigenes |
Current Unigene builds | |||||
[SGN-E371700] | SGN-U579101 | Tomato 200607 | Build 2 | 271 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T184029 [Download][View] | Facility Assigned ID: FA0AAD17BH11RM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.977 | Expected Error Rate: 0.0027 | Quality Trim Threshold: 14.5 |