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EST details — SGN-E371792

Search information 
Request: 371792Match: SGN-E371792
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C178771Clone name: TUS-30-A9
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C178771 is on microarray TOM1 spot ID 1-1-8.1.3.20 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C70636 [cLER-15-H13] Trace: SGN-T95205 EST: SGN-E282685 Direction: 5' Facility: TIGR
Clone: SGN-C178771 [TUS-30-A9] Trace: SGN-T184407 EST: SGN-E371793 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E371792Length: 743 bp (946 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E371792 [] (trimmed) GAAGATTAAGCAAAACAACTTAAATTTATAGCAAGACAGATATCCAATGTAACAAAATAAAAATCCAAAATTGAAACAGTTGAGGCCTCATAATA
ATGAAAAACACGGAGAATCTTCAAAATCTAAAAGACTTTTAATTCAGTATTGGCCAAATGGCTCGCGTCGATCCTCTTCTTCCCTAATAACGTCC
AATTCCCCAAACTCTAATCAGACCATCTGTATAGCCACTGAAAAGTGTGCTTCCATCAGCACTCCAGCTCAAACTGGTGCAGTATATGACCTTGG
TTTTGGAATCGGTAGCAGCAGTTCCGAACATTTCACTCTCTTGTTTCAGATCAACTTTAAGATCAACCACGATGCTTTTGCTCTCCAAATCCCAA
ATCTTGATACTAGATTCAGTAGCAGCACAGAGCCAATACCTATTCGGGCTAAAACAGAGGGTGTGGATAATGGAGCCAGCATCAAGAGAGTACAG
TTTCTTCCCTTCAGCCAAATCCCATAGCAATATGACACCATCTTTCCCTCCGCTAGCACACAACGAACCATCTGGGGACACGGCCACAGTATTCA
CATACCCGCTGTGACCCGCAAGAGTAGACCTGAGCTTACAGTTGGTGAGATTCCAGATTTTGACAGTGCGATCCCATGAACCAGACACAATAGTG
GGCTGAAGATTATTTGGGCTAAAACGGACACAAGAAACCCAATCAGAGTGTGAATCCTGTTCCTGAATTGTGTACTTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E371792] SGN-U582594 Tomato 200607 Build 2 106 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T184406 [Download][View] Facility Assigned ID: FA0AAD18AA05FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.977 Expected Error Rate: 0.0051 Quality Trim Threshold: 14.5