EST details — SGN-E371820
Search information |
Request: 371820 | Match: SGN-E371820 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C178909 | Clone name: TUS-30-G3 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C178909 is on microarray TOM1 spot ID 1-1-6.3.3.17 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C71401 [cLER-17-M1] | Trace: SGN-T95973 | EST: SGN-E283122 | Direction: 5' | Facility: TIGR |
Clone: SGN-C178909 [TUS-30-G3] | Trace: SGN-T184433 | EST: SGN-E371819 | Direction: 3' | Facility: INRA |
Sequence |
Sequence Id: SGN-E371820 | Length: 734 bp (925 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E371820 [] (trimmed)
TTTCACCGGAGATGCCAAAATTCATCTAGACACCTTTTTATCGGTCTTTAACATATCTGGCCTCCCTGGAGAATATTACCACAACACAGGTAAGC
TATCAAATGATGGAGACAGATTCGTCGATGGAGCAATAATAGCAGCCGCAAGAACGTTGCCCACTTGGTCAGATGGAGATCTCCCTCCAATTCCA
AGTCTAGAGAGGAAAGCAGTGAAGGAGCTGCAAGAAGAATGCCACCAGATGCTTGCAGAATTTCCCACAACTTCTGACGAAGACCAGAAAATCCT
AGATTCGATGCCTGAATGCAGGAGAACATTCGAAGCAGCAATAAAGTATAGATTACATCGGAAATTACTGATAGAGAAGGTTATACAGGCCTTGG
ACATTTACCAAGACAGGATTCTGTTCTAAACATGAATAACAGCAGGAGTTGAAGCAATCTTTACCAGAAATCATGTAGCCATAGAAGACGGGCGT
CAAGATTATGGTTCCATTTCAGCTATGCAGAAAGCTTTATCTATCACAATAGCTTTTGCAACATTTTGAGGGCTTTTGTTGGGGGTGGGTGTAGG
AAGTAGCTAGTAATGGTGTATAGGTGGAAAATGACTTATACCATTAGTTTTGGAAAGATATGAAGTGAAGAAAAATGAGAAGTTCTCTATAGAAA
TCATGATGAAAATGAAGGATAGCTTTGGTGGATATGTTTGATAACAAGTAGAAAGGCTCTTTTGCATGA
TATCAAATGATGGAGACAGATTCGTCGATGGAGCAATAATAGCAGCCGCAAGAACGTTGCCCACTTGGTCAGATGGAGATCTCCCTCCAATTCCA
AGTCTAGAGAGGAAAGCAGTGAAGGAGCTGCAAGAAGAATGCCACCAGATGCTTGCAGAATTTCCCACAACTTCTGACGAAGACCAGAAAATCCT
AGATTCGATGCCTGAATGCAGGAGAACATTCGAAGCAGCAATAAAGTATAGATTACATCGGAAATTACTGATAGAGAAGGTTATACAGGCCTTGG
ACATTTACCAAGACAGGATTCTGTTCTAAACATGAATAACAGCAGGAGTTGAAGCAATCTTTACCAGAAATCATGTAGCCATAGAAGACGGGCGT
CAAGATTATGGTTCCATTTCAGCTATGCAGAAAGCTTTATCTATCACAATAGCTTTTGCAACATTTTGAGGGCTTTTGTTGGGGGTGGGTGTAGG
AAGTAGCTAGTAATGGTGTATAGGTGGAAAATGACTTATACCATTAGTTTTGGAAAGATATGAAGTGAAGAAAAATGAGAAGTTCTCTATAGAAA
TCATGATGAAAATGAAGGATAGCTTTGGTGGATATGTTTGATAACAAGTAGAAAGGCTCTTTTGCATGA
Unigenes |
Current Unigene builds | |||||
[SGN-E371820] | SGN-U584726 | Tomato 200607 | Build 2 | 10 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T184434 [Download][View] | Facility Assigned ID: FA0AAD18AD02RM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.966 | Expected Error Rate: 0.0079 | Quality Trim Threshold: 12.5 |