EST details — SGN-E371933

Search information 
Request: 371933Match: SGN-E371933
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C179070Clone name: TUS-30-M20
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C179070 is on microarray TOM1 spot ID 1-1-5.1.2.6 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C78707 [cLES-6-I15] Trace: SGN-T98553 EST: SGN-E287101 Direction: 5' Facility: TIGR
Clone: SGN-C179070 [TUS-30-M20] Trace: SGN-T184546 EST: SGN-E371932 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E371933Length: 723 bp (907 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E371933 [] (trimmed) TTCTACTTCTCTCGTTGGAGTTAATAATGAGCTTCATTCTTCAAGATTTCAAGTAAATTCGTCGACAATTCGTTGTTGTTCAAGAAGTCATGCTT
ACATACCAAAGCTCGAGCCTTTTAGCAGAACCAAGTTTGATAGAGTTTTTAAAGATCCCCCTTTGATCGAAAAATCTGAAAATGAACTTGCCGAT
TATTGTTCTGTTCTAGAAGGTGATGATTCTTATAGCTGCTGGCAAGCCTATTTTGAACTCAAAGATCTTGAAAAAGAAGCACCTAAGGAGGAGGT
AGAGAGGCTAATACTTCAAGCAGGGGGAGTGAAAACTCTCATTGGCTGCTTACATGGAGTTTCAGACATGCACAAAGCCAAAAAGGAAAGCAAAG
AATCAGCCAAACCTGTCAATCTTGATGCACAACGGGCAGGAGGACTGTGTCCTATACCAGATGGATTGCCAAAGTCGAGAGAAGAGCTCGAGGAA
GAGGAGAAAGCTAGAATGCCAGATTCACCCTATACTAAACTGCTCAGAGCCAAAGGAACACACCCTGTTTGGTACTGATTACACTTGACTACTGG
TATGGAGCTTCATAAAAAGCACGCTCTTTTGGAGCTTCAGATAATCAGGTCAAACAATGGAATTGAATAGTATTTTCTTGGCCAATGTGGTAAAA
ATTATCTGGTGATGTAATATTAAGCCTGTGGGGATNGTATCACGTATTTTTGTTAGTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E371933] SGN-U580940 Tomato 200607 Build 2 33 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T184547 [Download][View] Facility Assigned ID: FA0AAD18BG10RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.963 Expected Error Rate: 0.0030 Quality Trim Threshold: 14.5