EST details — SGN-E371959
Search information |
Request: 371959 | Match: SGN-E371959 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C178824 | Clone name: TUS-30-C14 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C178824 is on microarray TOM1 spot ID 1-1-3.3.3.20 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C70790 [cLER-15-O17] | Trace: SGN-T95315 | EST: SGN-E282795 | Direction: 5' | Facility: TIGR |
Clone: SGN-C178824 [TUS-30-C14] | Trace: SGN-T184574 | EST: SGN-E371960 | Direction: 5' | Facility: INRA |
Sequence |
Sequence Id: SGN-E371959 | Length: 721 bp (937 bp untrimmed) |
Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E371959 [] (trimmed)
AGTATTAAAACAAATGCCATTAATTCAAAAGATGAAGGGAACACAACAAAGTAAAATTACTACAGTTTCTCCAGAGAAAAACTTTAAGGAGGATT
CAAACAAGCTTCCCCTAAATACATAGGGTCAGTTATACATTACATAATTAAAAATTGGCATTTTAGTATCCTTCGGGCTTGTAAGCGATGAAACT
GATGCACTGCACTTGACGAACATTGTCGAATCCGATGATACGGACCCATGCCTGAGGGTAAGCCTTCTTTGCCTCCTGCACCTCAGCCAAGACCT
GGGTTGCATCAGTGCACCCAAACATGGGCAACTTCCACATGGTCCAGTATCTGCCATCGTAGTATCCTGGTGACTTATGGTTCTCACGGTACACA
AATCCGTGCTCAGTCTCGAATTCCAAGCAAGGAACCCATCCATTTTTCAATAGGTACTCAATTTCGCTGAGCAATTGCTCGTCGGACAAATCAGG
AAGGTACGACAGAGTCTCGTACTTCTTCATGTTAATTGGTGGCCACACCTGCATGCAACTGACTCTTCCACCGTTGCTAGCAATGGAGGTAATGT
CAAGGTTTTGCTTCCTTGAAACAGGGAAAGAAGCAGTGGACTTGAGTCCAGTGAAGGGTGCAACCATGCTAGCTTGTGCACCATTGCCGCGGGTG
GCAACAGCAGCTGAAGAAACTTTTTTTTTTTTTTTTTAACAGAGAACAAACATTTG
CAAACAAGCTTCCCCTAAATACATAGGGTCAGTTATACATTACATAATTAAAAATTGGCATTTTAGTATCCTTCGGGCTTGTAAGCGATGAAACT
GATGCACTGCACTTGACGAACATTGTCGAATCCGATGATACGGACCCATGCCTGAGGGTAAGCCTTCTTTGCCTCCTGCACCTCAGCCAAGACCT
GGGTTGCATCAGTGCACCCAAACATGGGCAACTTCCACATGGTCCAGTATCTGCCATCGTAGTATCCTGGTGACTTATGGTTCTCACGGTACACA
AATCCGTGCTCAGTCTCGAATTCCAAGCAAGGAACCCATCCATTTTTCAATAGGTACTCAATTTCGCTGAGCAATTGCTCGTCGGACAAATCAGG
AAGGTACGACAGAGTCTCGTACTTCTTCATGTTAATTGGTGGCCACACCTGCATGCAACTGACTCTTCCACCGTTGCTAGCAATGGAGGTAATGT
CAAGGTTTTGCTTCCTTGAAACAGGGAAAGAAGCAGTGGACTTGAGTCCAGTGAAGGGTGCAACCATGCTAGCTTGTGCACCATTGCCGCGGGTG
GCAACAGCAGCTGAAGAAACTTTTTTTTTTTTTTTTTAACAGAGAACAAACATTTG
Unigenes |
Current Unigene builds | |||||
[SGN-E371959] | SGN-U578438 | Tomato 200607 | Build 2 | 819 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T184573 [Download][View] | Facility Assigned ID: FA0AAD18BB07FM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.979 | Expected Error Rate: 0.0034 | Quality Trim Threshold: 14.5 |