EST details — SGN-E372080

Search information 
Request: 372080Match: SGN-E372080
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C179002Clone name: TUS-30-J24
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C179002 is on microarray TOM1 spot ID 1-1-1.2.2.5 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C78517 [cLES-5-O17] Trace: SGN-T98072 EST: SGN-E285589 Direction: 5' Facility: TIGR
Clone: SGN-C179002 [TUS-30-J24] Trace: SGN-T184871 EST: SGN-E372079 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E372080Length: 705 bp (870 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E372080 [] (trimmed) CTTTACCAATCAAGTTACATCCCAAGAGCCAGTATCAGTTTCTCAGGCGTTAGTGTCTGGCATCGGTCAGCAGGGTACGTATTCAAAAATGTCAT
CCGGTATATGGGGTACTTTTCCACCACCTCAGCAAGCTTTTGGCTCTCAGTATAGCAAGGATTCTTCTCATATTTTCCAATCACATCAAATGAAT
ATTGTGGAGTCGTCATTATCTGCTCCTGGGAGGCAAAGTGATCAATACTTGAATAGAGGTAGTTTTGCATCCCAGATTGGTACTAGCTCAGTGAA
TTCCCTGGTTTCTTCTGAAGGGGAAGAACAGCGACCAAAGGAAAGTCATTCTCAGCAAATATCAGTGACAAATGTTGACCACATCCAGAAGATGA
ATGATTCACAGGGTAGAGAACCTTTTATCAAGTATATCTTGGGAGGATCTGCTGCAAATGCTGCATCTATGCAGAGAGATATTGAAGCCTTTGGC
CGAACTTTGAAGCCCAACCTTTCAAATCAGAACTATTCCCTATTAAACCAAGTGCAGGCTATCAAACATGTGGAGGTCGATCCAAGCAATAGGGA
CTTCAAGAGAATGAAAGTAGCAGACAGCAGTACAGGTGCTCCACAATTTTCTTCTGGGGACACTGAAATGTTGGGAGTCTCTGTGCCAGAGGATT
TGCAAAGAAGCATTTCATCTCAACAAGGGAGAAAAATGTC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E372080] SGN-U587801 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T184872 [Download][View] Facility Assigned ID: FA0AAD18DE12RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.973 Expected Error Rate: 0.0051 Quality Trim Threshold: 14.5