EST details — SGN-E372152
Search information |
Request: 372152 | Match: SGN-E372152 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C178944 | Clone name: TUS-30-H14 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C178944 is on microarray TOM1 spot ID 1-1-3.4.3.21 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C78293 [cLES-5-D20] | Trace: SGN-T98324 | EST: SGN-E285841 | Direction: 5' | Facility: TIGR |
Clone: SGN-C178944 [TUS-30-H14] | Trace: SGN-T184943 | EST: SGN-E372151 | Direction: 3' | Facility: INRA |
Sequence |
Sequence Id: SGN-E372152 | Length: 698 bp (905 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E372152 [] (trimmed)
CATTATTATAGTGCTGGTAAACTTGATTGAAATTCGAATTATTCTTACACGGAATAAAAAGATGGAAAACAAGGGAAAATGATTACAATTTCTAC
AAGGGAAAACCCAAAGGAGAATTCAAACAAACTGTCCCTATAAACATAGGGCAATTAGTTTTTCTAAAACTTATTATCCTTCGGGCTTGTAAGCG
ATGAAACTGATGCACTGCACTTGACGAACATTGTCGAATCCGATGATACGGACCCATGCCTGTGGGTAAGCCTTCTTTGCCTCCTGCACCTCAGC
CAAGACCTGGGTTGCATCAGTGCACCCGAACATGGGCAACTTCCACATGGTCCAGTATCTGCCATCGTAGTATCCTGGTGACTTATGGTTCTCAC
GGTACACAAATCCGTGCTCAGTCTCAAATTCCAAGCAAGGAACCCATCCATTTTTCAATAGGTACTCAATTTCGCTGAGCAATTGCTCGTCGGAC
AAATCAGGAAGGTACGACAGAGTCTCGTACTTCTTCATGTTAATTGGTGGCCACACCTGCATGCAACTGACTCTTCCACCGTTGCTAGCAATGGA
GGTAATGTCAAGGTTTTGCTTCCTTGAAACAGGGAAAGAAGCGGTGGACTTGAGTCCAGTGAAGGGTGCAACCATGCTAGCTTGTGCACCATTGC
CGCGGGTGGCAACAGCTGCTGAGGACATTACTG
AAGGGAAAACCCAAAGGAGAATTCAAACAAACTGTCCCTATAAACATAGGGCAATTAGTTTTTCTAAAACTTATTATCCTTCGGGCTTGTAAGCG
ATGAAACTGATGCACTGCACTTGACGAACATTGTCGAATCCGATGATACGGACCCATGCCTGTGGGTAAGCCTTCTTTGCCTCCTGCACCTCAGC
CAAGACCTGGGTTGCATCAGTGCACCCGAACATGGGCAACTTCCACATGGTCCAGTATCTGCCATCGTAGTATCCTGGTGACTTATGGTTCTCAC
GGTACACAAATCCGTGCTCAGTCTCAAATTCCAAGCAAGGAACCCATCCATTTTTCAATAGGTACTCAATTTCGCTGAGCAATTGCTCGTCGGAC
AAATCAGGAAGGTACGACAGAGTCTCGTACTTCTTCATGTTAATTGGTGGCCACACCTGCATGCAACTGACTCTTCCACCGTTGCTAGCAATGGA
GGTAATGTCAAGGTTTTGCTTCCTTGAAACAGGGAAAGAAGCGGTGGACTTGAGTCCAGTGAAGGGTGCAACCATGCTAGCTTGTGCACCATTGC
CGCGGGTGGCAACAGCTGCTGAGGACATTACTG
Unigenes |
Current Unigene builds | |||||
[SGN-E372152] | SGN-U580869 | Tomato 200607 | Build 2 | 1124 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T184944 [Download][View] | Facility Assigned ID: FA0AAD18DD07RM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.979 | Expected Error Rate: 0.0132 | Quality Trim Threshold: 14.5 |