EST details — SGN-E372152

Search information 
Request: 372152Match: SGN-E372152
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C178944Clone name: TUS-30-H14
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C178944 is on microarray TOM1 spot ID 1-1-3.4.3.21 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C78293 [cLES-5-D20] Trace: SGN-T98324 EST: SGN-E285841 Direction: 5' Facility: TIGR
Clone: SGN-C178944 [TUS-30-H14] Trace: SGN-T184943 EST: SGN-E372151 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E372152Length: 698 bp (905 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E372152 [] (trimmed) CATTATTATAGTGCTGGTAAACTTGATTGAAATTCGAATTATTCTTACACGGAATAAAAAGATGGAAAACAAGGGAAAATGATTACAATTTCTAC
AAGGGAAAACCCAAAGGAGAATTCAAACAAACTGTCCCTATAAACATAGGGCAATTAGTTTTTCTAAAACTTATTATCCTTCGGGCTTGTAAGCG
ATGAAACTGATGCACTGCACTTGACGAACATTGTCGAATCCGATGATACGGACCCATGCCTGTGGGTAAGCCTTCTTTGCCTCCTGCACCTCAGC
CAAGACCTGGGTTGCATCAGTGCACCCGAACATGGGCAACTTCCACATGGTCCAGTATCTGCCATCGTAGTATCCTGGTGACTTATGGTTCTCAC
GGTACACAAATCCGTGCTCAGTCTCAAATTCCAAGCAAGGAACCCATCCATTTTTCAATAGGTACTCAATTTCGCTGAGCAATTGCTCGTCGGAC
AAATCAGGAAGGTACGACAGAGTCTCGTACTTCTTCATGTTAATTGGTGGCCACACCTGCATGCAACTGACTCTTCCACCGTTGCTAGCAATGGA
GGTAATGTCAAGGTTTTGCTTCCTTGAAACAGGGAAAGAAGCGGTGGACTTGAGTCCAGTGAAGGGTGCAACCATGCTAGCTTGTGCACCATTGC
CGCGGGTGGCAACAGCTGCTGAGGACATTACTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E372152] SGN-U580869 Tomato 200607 Build 2 1124 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T184944 [Download][View] Facility Assigned ID: FA0AAD18DD07RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.979 Expected Error Rate: 0.0132 Quality Trim Threshold: 14.5