EST details — SGN-E372189

Search information 
Request: 372189Match: SGN-E372189
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C179096Clone name: TUS-30-N22
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C179096 is on microarray TOM1 spot ID 1-1-3.2.2.6 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C78791 [cLES-6-M17] Trace: SGN-T98563 EST: SGN-E287111 Direction: 5' Facility: TIGR
Clone: SGN-C179096 [TUS-30-N22] Trace: SGN-T184980 EST: SGN-E372188 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E372189Length: 454 bp (880 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E372189 [] (trimmed) CTTGAATGACAAAGTTCTAATCAAGTGAGGCTGAAGATGAGGAAAAAACTTCTGGGGGATTGATTCTGACCCACGCTGCTAAGGACATACCTTCA
TTTGGCGCGGAGATAGCTGTGGGACCCAGTCCTCTCGACGAGGAAGGGAGAAGGAAAGCACTTTCAGTATCTCCTGCAAATACAGTTTTGAATTC
CAAATATGCTGGCAATGACTTCAAAGGAGCTGATGGTTCTGAATACATCACATTGAGGGCATCTGATGTAATTGCTGTGCTTCAGTAAATGTTGT
GTTATTTATTTAACAAGTCAGGTCATTCTCATACCAGTATTTTGCAGTGTAACATATAAAAGAGGAGATTGTTGCAACCATTTTGGAATAAAACT
TTTGCAAATTAATGGTCAATTTCTAGTGCAGAATCCTCACATCTCGATGAGTTCTGGAACAACTCAAGGAAAAG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E372189] SGN-U591896 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T184981 [Download][View] Facility Assigned ID: FA0AAD18DG11RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.964 Expected Error Rate: 0.0285 Quality Trim Threshold: 12.5