EST details — SGN-E372207

Search information 
Request: 372207Match: SGN-E372207
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C178797Clone name: TUS-30-B11
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C178797 is on microarray TOM1 spot ID 1-1-6.2.3.20 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C70715 [cLER-15-K5] Trace: SGN-T95137 EST: SGN-E282617 Direction: 5' Facility: TIGR
Clone: SGN-C178797 [TUS-30-B11] Trace: SGN-T184648 EST: SGN-E372208 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E372207Length: 581 bp (925 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E372207 [] (trimmed) GGGGGTAAAAACATTCAAAAAATAAAGTTTGTACAAAAAATAAAGTTTGGTTAGGATGGGATAAGGGATATTGCCAACATAGGAGGGAAATTAGG
TTTTTTTTCCTTGTTAGCTTGGGAATGTTGAATGAGCCCAAAAACAAATGACCTATTTAAAAAGTAATTGCAAAATTATGAGGAAAAAAAATAGG
ATTTGGGTACAAATTCCATGTTTTCATCGCCCAAAATGGGGGGAACTAAATGATTTTTGTCCCACGGATAGCGAACGACGTGATTTTTTGATTGT
TTTAGTAAAAAACCCTTCCAAAAACTTGGCTGGGATTTCATTAACCCTTTTAAATCCAATACAACTCAACTGTTGCTCAAAAACTGGAAGGGATT
CATTTCCATTGGGGGACTTCATTACTTGTCTCATTGTTGGCCTAACTTTTGGCCTTGGGGGAAAACAAACAAGCCCAAGTCTGAAAATCATTTGA
ACCTTTTTATTTACATACCCTGAATTCAACCTTTGATCAACTGGATCAAAAATTTTACCTAGTTGTAAACATTCAATCCCCCAATCAGCTTGTAC
TAAAGCTCCTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E372207] SGN-U593853 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T184647 [Download][View] Facility Assigned ID: FA0AAD18CA06FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.903 Expected Error Rate: 0.0209 Quality Trim Threshold: 14.5