EST details — SGN-E372209
Search information |
Request: 372209 | Match: SGN-E372209 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C178801 | Clone name: TUS-30-B15 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C178801 is on microarray TOM1 spot ID 1-1-2.2.3.20 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C70727 [cLER-15-L18] | Trace: SGN-T95432 | EST: SGN-E282912 | Direction: 5' | Facility: TIGR |
Clone: SGN-C178801 [TUS-30-B15] | Trace: SGN-T184650 | EST: SGN-E372210 | Direction: 5' | Facility: INRA |
Sequence |
Sequence Id: SGN-E372209 | Length: 729 bp (919 bp untrimmed) |
Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E372209 [] (trimmed)
AGGTGTAGCAGAATTAGTCGCATCTACTTGCATTTAACCTAGTACCGATGTAAATTTTTACAAGTGACAAATCAAGTCCGTCCAGCAACAAGTTG
GACTGCAGATAAACAAATACATTATTCTCGTCATAAAAGTTATCATAGAAACCTAAGTTTTGTAAGCAGTGCACTCAAGCCACTGATATGATCAT
GCTAAAGACCGAATTGATGGGAAGTATGTACATTGAGTTGGCACTTTAAACAAACGAGCTTCCTTGCGCACATCACATTACATGAGACATCCCCG
ACGTTGTTTTTTCTTCTCCTTTTGCTTTTGTGGTGGCTTGATGACGACCTTGATTGCAGCATCAAATACAGCTTTCACATTCTGTTGTGGTTTAG
AGCTACATTCGATATATTAGGCAGCACCAATTTGTTTCCGCTAGCGTCCTCTCCCTGCGCAGTGGTGACAGGAACTAGTCCAGGATGATCAGCCA
AGAAGTGCTTATCCTCACGAAGATCAAGTTTGGTGCCAGCTAATACCACCGGAATTCCAGGAGCATAATGCTGAAGTTCGGGAATCCACTTCTTA
AGTATGTTTTCATAGCTTGCACGACTCACCAAGGAGAACGCTAGGACAAAAACATCTGCTCCTGGGTAGCTCAGTGGCCTTAATCTGTTATAATC
TTCTTGTCCTGCAGTATCCCAGAGACCTAAATTTACTGTGGTCCCTTCCACACCACATTGGCGC
GACTGCAGATAAACAAATACATTATTCTCGTCATAAAAGTTATCATAGAAACCTAAGTTTTGTAAGCAGTGCACTCAAGCCACTGATATGATCAT
GCTAAAGACCGAATTGATGGGAAGTATGTACATTGAGTTGGCACTTTAAACAAACGAGCTTCCTTGCGCACATCACATTACATGAGACATCCCCG
ACGTTGTTTTTTCTTCTCCTTTTGCTTTTGTGGTGGCTTGATGACGACCTTGATTGCAGCATCAAATACAGCTTTCACATTCTGTTGTGGTTTAG
AGCTACATTCGATATATTAGGCAGCACCAATTTGTTTCCGCTAGCGTCCTCTCCCTGCGCAGTGGTGACAGGAACTAGTCCAGGATGATCAGCCA
AGAAGTGCTTATCCTCACGAAGATCAAGTTTGGTGCCAGCTAATACCACCGGAATTCCAGGAGCATAATGCTGAAGTTCGGGAATCCACTTCTTA
AGTATGTTTTCATAGCTTGCACGACTCACCAAGGAGAACGCTAGGACAAAAACATCTGCTCCTGGGTAGCTCAGTGGCCTTAATCTGTTATAATC
TTCTTGTCCTGCAGTATCCCAGAGACCTAAATTTACTGTGGTCCCTTCCACACCACATTGGCGC
Unigenes |
Current Unigene builds | |||||
[SGN-E372209] | SGN-U586912 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T184649 [Download][View] | Facility Assigned ID: FA0AAD18CA08FM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.976 | Expected Error Rate: 0.0170 | Quality Trim Threshold: 14.5 |