EST details — SGN-E372209

Search information 
Request: 372209Match: SGN-E372209
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C178801Clone name: TUS-30-B15
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C178801 is on microarray TOM1 spot ID 1-1-2.2.3.20 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C70727 [cLER-15-L18] Trace: SGN-T95432 EST: SGN-E282912 Direction: 5' Facility: TIGR
Clone: SGN-C178801 [TUS-30-B15] Trace: SGN-T184650 EST: SGN-E372210 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E372209Length: 729 bp (919 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E372209 [] (trimmed) AGGTGTAGCAGAATTAGTCGCATCTACTTGCATTTAACCTAGTACCGATGTAAATTTTTACAAGTGACAAATCAAGTCCGTCCAGCAACAAGTTG
GACTGCAGATAAACAAATACATTATTCTCGTCATAAAAGTTATCATAGAAACCTAAGTTTTGTAAGCAGTGCACTCAAGCCACTGATATGATCAT
GCTAAAGACCGAATTGATGGGAAGTATGTACATTGAGTTGGCACTTTAAACAAACGAGCTTCCTTGCGCACATCACATTACATGAGACATCCCCG
ACGTTGTTTTTTCTTCTCCTTTTGCTTTTGTGGTGGCTTGATGACGACCTTGATTGCAGCATCAAATACAGCTTTCACATTCTGTTGTGGTTTAG
AGCTACATTCGATATATTAGGCAGCACCAATTTGTTTCCGCTAGCGTCCTCTCCCTGCGCAGTGGTGACAGGAACTAGTCCAGGATGATCAGCCA
AGAAGTGCTTATCCTCACGAAGATCAAGTTTGGTGCCAGCTAATACCACCGGAATTCCAGGAGCATAATGCTGAAGTTCGGGAATCCACTTCTTA
AGTATGTTTTCATAGCTTGCACGACTCACCAAGGAGAACGCTAGGACAAAAACATCTGCTCCTGGGTAGCTCAGTGGCCTTAATCTGTTATAATC
TTCTTGTCCTGCAGTATCCCAGAGACCTAAATTTACTGTGGTCCCTTCCACACCACATTGGCGC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E372209] SGN-U586912 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T184649 [Download][View] Facility Assigned ID: FA0AAD18CA08FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.976 Expected Error Rate: 0.0170 Quality Trim Threshold: 14.5