EST details — SGN-E372312

Search information 
Request: 372312Match: SGN-E372312
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C178855Clone name: TUS-30-D21
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C178855 is on microarray TOM1 spot ID 1-1-4.4.2.3 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C71216 [cLER-17-D3] Trace: SGN-T95867 EST: SGN-E283016 Direction: 5' Facility: TIGR
Clone: SGN-C178855 [TUS-30-D21] Trace: SGN-T184751 EST: SGN-E372311 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E372312Length: 684 bp (891 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E372312 [] (trimmed) TTTTATTACCCATGGATTTATTTCTAATTGTTGTTACATTAGCTACCTCCTTTATTCTACTTTTCATTCTTCATAAACAATTTTACTCAGTTAAA
AAGCAGAGTAGTAGTAGTAGAAAGGTACCTGAAGCTGGCGGAGCATGGCCTATTATCGGCCATCTCCACCTTCTCGGTGGATCTGAATCTGATCA
CTTGCCTCACAAAATGTTGGGCCGCTTGGCAGATAAGTACGGGCCTATTTTCGGAATGAAGCTTGGAGTTCATCAGGTTGTAGTTGTGAGTGATC
ACAAATTAGCAAAGGAGTGCTTCACAACTAACGATTTAGCCCTAGCAGGTCGGCCTAAATCAATGGCTTCAGAGATTATAGGCTACAAACATGCT
ATGTTTGGACTTTGTTCTTACGGTCCGTACTGGAGAGAAACAAGGAAAATTGCCACAATTGAACTTTTCTCCGCTCGACGAATCGAGATGCTCAA
ACACATCAGAGAATTTGAGGTAAAATCAGGTATTAAAGAGATTTATAATAATTGGGAGAAGAATAATTTAAATGGTGTTGTGAAGATGGAGATGA
AGGAATGGATTGGGGATTTATTTATGAACACTATGGGGAAAATATTATTCGGAAAAGGGCGAACGAGTAACGAGGACGAAGGAATAAATAAAGCT
CACAAAGCAATTCGAAGAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E372312] SGN-U564761 Tomato 200607 Build 2 12 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T184752 [Download][View] Facility Assigned ID: FA0AAD18CB11RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.974 Expected Error Rate: 0.0043 Quality Trim Threshold: 14.5