EST details — SGN-E372591
Search information |
Request: 372591 | Match: SGN-E372591 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C179355 | Clone name: TUS-31-I17 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C179355 is on microarray TOM1 spot ID 1-1-8.1.2.17 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C77422 [cLES-20-O12] | Trace: SGN-T102234 | EST: SGN-E290555 | Direction: 5' | Facility: TIGR |
Clone: SGN-C179355 [TUS-31-I17] | Trace: SGN-T185049 | EST: SGN-E372592 | Direction: 5' | Facility: INRA |
Sequence |
Sequence Id: SGN-E372591 | Length: 748 bp (893 bp untrimmed) |
Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E372591 [] (trimmed)
AGTATTAAAACAAATGCCATTAATTCAAAAGATGAAGGGAACACAACAAAGTAAAATTACTACAGTTTCTCCAGAGAAAAACTTTAAGGAGGATT
CAAACAAGCTTCCCCTAAATACATAGGGTCAGTTATACATTACATAATTAAAAATTGGCATTTTAGTATCCTTCGGGCTTGTAAGCGATGAAACT
GATGCACTGCACTTGACGAACATTGTCAAATCCGATGATACGGACCCATGCCTGAGGGTAAGCCTTCTTTGCCTCCTGCACCTCAGCCAAAACCT
GGGTTGCATCAGTGCACCCAAACATGGGCAACTTCCACATGGTCCATTATCTGCCATCGTACTATCCTGGTGACTTATGGTTCTCACGGTGCACA
AATCCGTGCTCATGCTGGAATTCCAAGCAAGGAACCCATCCATTTTTCAATAGGAACTCAATTTCGCTGAGCAATTGCTCGTCGGACAAATCAGG
AAGGTACGACAGAGTCTCGTACTTCTTCATGTTAATTGGAGGCCACACCTGCATGCAACTGACTCTTACACCGTTGCTAGCAGTGGAGGTAATGT
CAAGGTTTTGCTTCCTTGAAACAGGGAAAGAAGCAGTGGACTTGAGTCCAGTGAAGGGTGCAACCATGCTAGCTTGTGCACCATTGCCGGGCTCG
CACACCATACTCCAGACTTCGTCTAACTGATGGTCAAATGGCAAGTAGCTCCACACATAATGCTTATAGCGGGCCCTTCTTTA
CAAACAAGCTTCCCCTAAATACATAGGGTCAGTTATACATTACATAATTAAAAATTGGCATTTTAGTATCCTTCGGGCTTGTAAGCGATGAAACT
GATGCACTGCACTTGACGAACATTGTCAAATCCGATGATACGGACCCATGCCTGAGGGTAAGCCTTCTTTGCCTCCTGCACCTCAGCCAAAACCT
GGGTTGCATCAGTGCACCCAAACATGGGCAACTTCCACATGGTCCATTATCTGCCATCGTACTATCCTGGTGACTTATGGTTCTCACGGTGCACA
AATCCGTGCTCATGCTGGAATTCCAAGCAAGGAACCCATCCATTTTTCAATAGGAACTCAATTTCGCTGAGCAATTGCTCGTCGGACAAATCAGG
AAGGTACGACAGAGTCTCGTACTTCTTCATGTTAATTGGAGGCCACACCTGCATGCAACTGACTCTTACACCGTTGCTAGCAGTGGAGGTAATGT
CAAGGTTTTGCTTCCTTGAAACAGGGAAAGAAGCAGTGGACTTGAGTCCAGTGAAGGGTGCAACCATGCTAGCTTGTGCACCATTGCCGGGCTCG
CACACCATACTCCAGACTTCGTCTAACTGATGGTCAAATGGCAAGTAGCTCCACACATAATGCTTATAGCGGGCCCTTCTTTA
Unigenes |
Current Unigene builds | |||||
[SGN-E372591] | SGN-U578438 | Tomato 200607 | Build 2 | 819 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T185048 [Download][View] | Facility Assigned ID: FA0AAD19AE09FM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.983 | Expected Error Rate: 0.0158 | Quality Trim Threshold: 14.5 |