EST details — SGN-E372612

Search information 
Request: 372612Match: SGN-E372612
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C179451Clone name: TUS-31-M17
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C179451 is on microarray TOM1 spot ID 1-1-8.1.2.18 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C82263 [cLET-1-G3] Trace: SGN-T102362 EST: SGN-E292088 Direction: 5' Facility: TIGR
Clone: SGN-C82263 [cLET-1-G3] Trace: SGN-T102363 EST: SGN-E292089 Direction: 3' Facility: TIGR
Clone: SGN-C179451 [TUS-31-M17] Trace: SGN-T185070 EST: SGN-E372613 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E372612Length: 498 bp (900 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E372612 [] (trimmed) AGTATTAAAACAAATGCCATTAATTCAAAAGATGAAGGGAACACAACAAAGTAAAATTACTACAGTTTCTCCAGAGAAAAACTTTAAGGAGGATT
CAAACAAGCTTCCCCTAAATACATAGGGTCAGTTATACATTACATAATTAAAAATTGGCATTTTAGTATCCTTCGGGCTTGTAAGCGATGAAACT
GATGCACTGCACTTGACGAACATTGTCGAATCCGATGATACGGACCCATGCCTGAGGGTAAGCCTTCTTTGCCTCCTGCACCTCAGCCAAGACCT
GGGTTGCATCAGTGCACCCAAACTTTTTTTTTACCTTCAAATCTCAAAATCTTCTATATCAAGTCAAAACAAGACAAATAAATTAAAACGCAAAG
AACTTTTATTTACATCAAAACGAACATAGTCACTCCCGAATATGTATAAACATACAAGTAATGTTACAATAAAAGAAATACAAATACATATCTAA
TGCAGGAACAAACAGGAAAAAAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E372612] SGN-U580380 Tomato 200607 Build 2 55 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T185069 [Download][View] Facility Assigned ID: FA0AAD19AG09FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read -- flanking 5' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.941 Expected Error Rate: 0.0000 Quality Trim Threshold: 12.5