EST details — SGN-E372613
Search information |
Request: 372613 | Match: SGN-E372613 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C179451 | Clone name: TUS-31-M17 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C179451 is on microarray TOM1 spot ID 1-1-8.1.2.18 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C82263 [cLET-1-G3] | Trace: SGN-T102362 | EST: SGN-E292088 | Direction: 5' | Facility: TIGR |
Clone: SGN-C82263 [cLET-1-G3] | Trace: SGN-T102363 | EST: SGN-E292089 | Direction: 3' | Facility: TIGR |
Clone: SGN-C179451 [TUS-31-M17] | Trace: SGN-T185069 | EST: SGN-E372612 | Direction: 3' | Facility: INRA |
Sequence |
Sequence Id: SGN-E372613 | Length: 499 bp (895 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E372613 [] (trimmed)
TTTTTTTCCTGTTTGTTCCTGCATTAGATATGTATTTGTATTTCTTTTATTGTAACATTACTTGTATGTTTATACATATTCGGGAGTGACTATGT
TCGTTTTGATGTAAATAAAAGTTCTTTGCGTTTTAATTTATTTGTCTTGTTTTGACTTGATATAGAAGATTTTGAGATTTGAAGGTAAAAAAAAA
GTTTGGGTGCACTGATGCAACCCAGGTCTTGGCTGAGGTGCAGGAGGCAAAGAAGGCTTACCCTCAGGCATGGGTCCGTATCATCGGATTCGACA
ATGTTCGTCAAGTGCAGTGCATCAGTTTCATCGCTTACAAGCCCGAAGGATACTAAAATGCCAATTTTTAATTATGTAATGTATAACTGACCCTA
TGTATTTAGGGGAAGCTTGTTTGAATCCTCCTTAAAGTTTTTCTCTGGAGAAACTGTAGTAATTTTACTTTGTTGTGTTCCCTTCATCTTTTGAA
TTAATGGCATTTGTTTTAATACTA
TCGTTTTGATGTAAATAAAAGTTCTTTGCGTTTTAATTTATTTGTCTTGTTTTGACTTGATATAGAAGATTTTGAGATTTGAAGGTAAAAAAAAA
GTTTGGGTGCACTGATGCAACCCAGGTCTTGGCTGAGGTGCAGGAGGCAAAGAAGGCTTACCCTCAGGCATGGGTCCGTATCATCGGATTCGACA
ATGTTCGTCAAGTGCAGTGCATCAGTTTCATCGCTTACAAGCCCGAAGGATACTAAAATGCCAATTTTTAATTATGTAATGTATAACTGACCCTA
TGTATTTAGGGGAAGCTTGTTTGAATCCTCCTTAAAGTTTTTCTCTGGAGAAACTGTAGTAATTTTACTTTGTTGTGTTCCCTTCATCTTTTGAA
TTAATGGCATTTGTTTTAATACTA
Unigenes |
Current Unigene builds | |||||
[SGN-E372613] | SGN-U580380 | Tomato 200607 | Build 2 | 55 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T185070 [Download][View] | Facility Assigned ID: FA0AAD19AG09RM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.931 | Expected Error Rate: 0.0000 | Quality Trim Threshold: 12.5 |