EST details — SGN-E372660

Search information 
Request: 372660Match: SGN-E372660
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C179295Clone name: TUS-31-G5
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C179295 is on microarray TOM1 spot ID 1-1-4.3.2.8 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C77271 [cLES-20-H14] Trace: SGN-T102301 EST: SGN-E290622 Direction: 5' Facility: TIGR
Clone: SGN-C179295 [TUS-31-G5] Trace: SGN-T185118 EST: SGN-E372661 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E372660Length: 706 bp (918 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E372660 [] (trimmed) AAGTCGAAATCTTGACATATATTTGGGTGAAAAATCCTTTAGTGTTGGGACAAAAACCCAATCGCTGCATAATTCAGCATGAACACATTCGTAGG
AATGGTTGGCCCCATGACAGTGAGTATGAAGACCAAGGTATGGATATTCATTGTGATGCTTCAAGCTGTGATGTAACTTTTCTTCTTTTCTTCCT
TTTGATTTGCCTCATAAAAGCAAAGCTAGGACCACAAGTCCACAACTATAGTTACAATCATTCTAAGACATTAATAATATTCAACTAATATACTT
TAGAATTAGCAAGCAGTTCAGACTCAAAAAGATGTACAAAAGTTCTCTTAGAAAGTATTCAAATCACCCCTCACACCTGTCCACAGCAACCAGAA
AGCGAGAGTATAATCTCGAGCTGTGAGGTCATCAAACTTTTCTGACAATGAACCCCAAAAGAATACTACCCAAGCCAACCAGCAAGATGTACAAA
AGTCGAACTCCAGTACGACGTTCATGACGTCCATGCCTCAGAAGCTCCAGGTCTCGGCTGAGTTTAGCATTTTCTCGAAGAATGGAGTCTCTCTC
TTCCATCAACCTCAAAATGAGATCTCTGGCCTTAATGGAGTTGTCCTGAGGCTCACTGTCTTCTTGTAAATCACTGTCAGAAGCTGTTGGTGAAG
TTCCTTCCTCAGAATCTTCAGGGACTGGTGATGGTTTTCGC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E372660] SGN-U572969 Tomato 200607 Build 2 9 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T185117 [Download][View] Facility Assigned ID: FA0AAD19AD03FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.968 Expected Error Rate: 0.0042 Quality Trim Threshold: 14.5