EST details — SGN-E372686

Search information 
Request: 372686Match: SGN-E372686
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C179399Clone name: TUS-31-K13
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C179399 is on microarray TOM1 spot ID 1-1-4.3.2.13 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C82177 [cLET-1-C20] Trace: SGN-T102611 EST: SGN-E292337 Direction: 5' Facility: TIGR
Clone: SGN-C179399 [TUS-31-K13] Trace: SGN-T185144 EST: SGN-E372687 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E372686Length: 600 bp (903 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E372686 [] (trimmed) CAAGGGGCCAAAAACAAAAATTAACAAGAAAAGGGCCCATTTAATTTAACCCAAATTTCCACAACTTAATTTATACCCAAAATAATTTTGGTACC
CCACATTTTTTTTTTTCCATGGGTTAGAAAACCCTGCTTATTTTAAAGGAAAACTAACCCAATTTTTATTTTGTTAAATCCAATAAAATTTTCCA
ATTTAAAAATTTATCCCTGTTTGAAATCTTCCCCTCCACCTGCTTTAGGACCAGGAGGGGGGGCCCCAGAATTTGTTTTTTTTCCGAAAACAAAT
TTTTTGGTTTTATTACTTGATGGTTAAAAAGGACAACCGGGAGGGCCCCTTTTTGGTTTTTAATCCTCTTTCCCACCCTTTTTATAAATTTTCCC
CTTAAAAATTTGGAAAAAACCGGGTATTAATTTACCGATGGGAATTAGAAACAGGGGTTTTAACCAACCTCCCCAACCCTTTTTTTTTAAAAATT
TTTTAAAAAAAAAATTATTTTTTTCTTTTGGGTTTTAAAATTTCGGGTTGGTTTTGGGGGGACCCTGCACCCCGGGGAACCCATTATTTTTAAAC
CGGCCCCCCCCGGGGGGGACCTCCATTTTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E372686] SGN-U602715 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T185143 [Download][View] Facility Assigned ID: FA0AAD19AF07FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read -- flanking 5' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.847 Expected Error Rate: 0.0299 Quality Trim Threshold: 12.5