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EST details — SGN-E372716

Search information 
Request: 372716Match: SGN-E372716
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C179562Clone name: TUS-32-B8
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C179562 is on microarray TOM1 spot ID 1-1-1.2.1.10 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C82407 [cLET-1-N15] Trace: SGN-T102487 EST: SGN-E292213 Direction: 5' Facility: TIGR
Clone: SGN-C179562 [TUS-32-B8] Trace: SGN-T186198 EST: SGN-E372717 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E372716Length: 729 bp (875 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E372716 [] (trimmed) AAGATAAAAACATGTATAGATATCTGGTCTCAGCATGTAAGCTTCATTGTTTTGAGATCACTACTAAAGAAGTTCAACTTCATAGCTATGCTGAT
GAAATTAAGAGAACAAAGAAGGATGTGCATTGGACCTTCTTCTAGCAGATAACATTACCTTTTACATGATACATCCAATAATCCACTTGAAGCAT
TTCGTAAGGTTATTGCATACAGGCAGTACTACTTGTACACCAATGTCTTTTTGAGCATAAAACATTATTCATCTTTAAAAATCAATTCCTGTACG
CATAAATTAGTGATCTATGTATACTTGTTTTCTTGTTGATGAGCAATGTTACTCTTCATGTACATCAGACCCAAAGCTTCAGCCACACTTCTCCT
GGTCTCATCACCACACACTTGTAGAAGACTGTTCATCAGGGACTCCCTTTGGTCTACTTTTAAGTGTTTCTCAAGTCCACGAGCCACCATCTCCA
TCTCAGGCGAGAACTCTTCAGGAGGAAATATCTGGTGGATGACACATATTTTGAACAGTTCCACCACAGCTTCAGAATGCTTTCCCTGTATTTCC
AAGGCCCAAGCTTGCAAGAACCTTGACCTAGTGCGTGCAGCAACAGCTGCAGACACCATTCTTGCAGCCCGAGTACTCTCAAGTCCAACATTATC
AGCAAGCCCAGCAACAAAGTTTTGTGCTTCTTCACCATCAATTAGAACAAAAGCTGACTGACTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E372716] SGN-U596742 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T186197 [Download][View] Facility Assigned ID: FA0AAD20DA04FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.961 Expected Error Rate: 0.0026 Quality Trim Threshold: 14.5