EST details — SGN-E372793

Search information 
Request: 372793Match: SGN-E372793
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C179900Clone name: TUS-32-P10
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C179900 is on microarray TOM1 spot ID 1-1-7.4.1.17 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C86884 [cLET-44-J22] Trace: SGN-T111515 EST: SGN-E298879 Direction: 5' Facility: TIGR
Clone: SGN-C179900 [TUS-32-P10] Trace: SGN-T186275 EST: SGN-E372794 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E372793Length: 548 bp (881 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E372793 [] (trimmed) CCAAATATTTTAGGAATACAAGATAAACAACAACTCGAATGACCTTGAAGTACAGAAAGTTATTCTCAGCTAATCTATGTAGGTTTAACCAAAAG
TTTGGGGAAAAAATAATGAGATGTGAAATGATACAGTTGAACAATTAAACACATGATACAAATATGATATAGAAGGAAAAGAAGAGACTAGCTAT
AAGTCATAGCGCAAACTCAGCTTCTTTAACTCTTTCCAGATTAAATCTTTCCCTTAGCTCACATTGATATACGCCGGTCACCCTCTCGTGACAGA
AAACTACTACATTGTTTCAAAGAGGCCTAGTACGATGACCTCTAGCTTTGCCACAAAGAATAGCATTCTTTGGTATTGGGAGTTCATCTCTCCAA
GAATTGGCTGGGGAGTAAACTCTTAAGTAGAATTGTTGACCCAAGTACCTCCTTGACCAATTCTCAGACCTTATGTTCCACATTCCTACATTGTC
CAATGCCATGTATATTGCGGTCCATGACTTAGGATACACCTGGACGGTGCAACGTGCAATTGTGTCCCTTAAG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E372793] SGN-U568738 Tomato 200607 Build 2 4 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T186274 [Download][View] Facility Assigned ID: FA0AAD20DH05FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read -- flanking 5' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.964 Expected Error Rate: 0.0012 Quality Trim Threshold: 12.5