EST details — SGN-E372824

Search information 
Request: 372824Match: SGN-E372824
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C179668Clone name: TUS-32-F18
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C179668 is on microarray TOM1 spot ID 1-1-7.2.1.19 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C80171 [cLET-11-H15] Trace: SGN-T105347 EST: SGN-E292884 Direction: 5' Facility: TIGR
Clone: SGN-C179668 [TUS-32-F18] Trace: SGN-T186306 EST: SGN-E372825 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E372824Length: 553 bp (874 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E372824 [] (trimmed) CATAAAAAAAACAAAAAAACCTGGGGAAAACTCTAAAACAGGAAAATCCTTGAGTATTCATAAACAAAATTTACCCCTCCCAAGGCACTAAAGGG
GATAACAAAAAACCCTACCGGTTTCATTATTTTTCACTAAAAAAAACAAGTTTTTTCCTCATTTTGGATGATCTTGGCCCCAAAACCCTTCAAAC
CCTCATTTGGGATCTTTGCAAAAAGGACAAAAAAGTATATCTTTTCCTTTGCGTCCTCATCTTCATTCCTTTTGCAACCAATACAAACTTTGATA
CCTTTTGGAACCCTTTGGATCCCTTTGCTCCAAATCTGTTTGTTGACCTTCACGCCCCCTTTGACCCCCTTGGTTCCCATGGCTTTTTGGGCAAA
CTTTTGGATCTCCTTGGGGGCTGCCGGGGCCTTTTTCTTGAATGCCCACCCTTGCAAACCCTTGGGGAGATTAATGGGGAACCCCCTGGAAACAA
CCTCCTTTTTTTTTCCTTTAGTTTTCTCCCCCATTTTCTCTCCTTTTTTTACCTACCCTTACCGTTAAAGGGTTGGAC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E372824] SGN-U604122 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T186305 [Download][View] Facility Assigned ID: FA0AAD20DC09FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read -- flanking 5' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.890 Expected Error Rate: 0.0329 Quality Trim Threshold: 12.5