EST details — SGN-E372848

Search information 
Request: 372848Match: SGN-E372848
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C179766Clone name: TUS-32-J20
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C179766 is on microarray TOM1 spot ID 1-1-5.2.1.20 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C80720 [cLET-13-D18] Trace: SGN-T105844 EST: SGN-E294001 Direction: 5' Facility: TIGR
Clone: SGN-C179766 [TUS-32-J20] Trace: SGN-T186328 EST: SGN-E372847 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E372848Length: 719 bp (913 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E372848 [] (trimmed) TTTGCAAAGACTCAACCAAGTATGTAGGTTTCATTTGCAACAAGAACAAAGTTGTTGCTGTCAATTTCAATGGTAGAAACTTCAAGGGAAATCCT
CTGTCTCTCAAAGATTTCATTAATGGAATCCCAACTCTCGAAATCTTCCATTCCAACTCCAACAACTTCACTGGAGAAATACCCAATAATATATC
GACCCAGAGTATTCCTAATCTTTTCGAACTTGATTTGAGCAACAACAAATATGTTGGTTTATTTCCAAGAGCTGTTCTTGGTGCCACCAGGTTAA
CTTATTTGGATCTCAGATTCAACCAAATCGAAGGTCCAGTCGACCCTCAAGTATTCACACTCGACCTTGATATTCTTTTTCTCAACAACAATCAA
TTTTCCGGGAAAATCCCAGAAAATTTTGGCCGTACTGCTGCCCTGTATCTTACATTAGCCAACAATAAATTCATTGGTGAAATCCCCAAAAGCAT
TGGGTATGCGAAGGGAAATCTCCTTGAGGTTCTCTTCTTCAATAATCAACTTACGGGTTGCTTGCCTTATGAGATAGGGATGTTGAAACTGGCCT
CTGTATTTGATGCTAGTAAGAACAAATTAACAGGTCCTATCCCGCAATCTTTCGGTTGCCTTGTGCAAATGGAAGTGATGGATCTGTCTTACAAT
CAATTATACGGCGAAGTGCCCGAGACATTGTGCAAGATCAGTAGCTTGAAGGAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E372848] SGN-U575978 Tomato 200607 Build 2 35 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T186329 [Download][View] Facility Assigned ID: FA0AAD20DE10RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.967 Expected Error Rate: 0.0010 Quality Trim Threshold: 14.5