EST details — SGN-E372913
Search information |
Request: 372913 | Match: SGN-E372913 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C179713 | Clone name: TUS-32-H15 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C179713 is on microarray TOM1 spot ID 1-1-2.4.1.15 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C80283 [cLET-11-M18] | Trace: SGN-T105324 | EST: SGN-E292861 | Direction: 5' | Facility: TIGR |
Sequence |
Sequence Id: SGN-E372913 | Length: 404 bp (914 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E372913 [] (trimmed)
GAAAATGAATTCAGTTGCAGCTATGGCTATGGTGTTTATGATCCTTCTATCGGCCAACATCGACACAGTTGGCGTCGCTGCTCAAGGCGTCAATT
GCTATGATAACTGCAACACCGGATGCGCCGGTCTCCCATCCAAGCAATATATCAAATGTGATAAGAAGTGCCACAAAAGATGTGGAGATGATGAC
AAAATTGATGGAAACGTTGGTTGAAAGTGATGAAATTTACTAGCAAGCTATTATTATATGGAGTTCCATAAATTTACTTCTCTCTTCGATAATAA
ACTTTACTTGTACTATGACTTTTTACTATAAGATGCATTGTATGATGATGAAACTATGTACTACTATTTGATATTATAATTGTTAATTCAATAAA
CAAAATTAGTCGAGTCAAAAAAAA
GCTATGATAACTGCAACACCGGATGCGCCGGTCTCCCATCCAAGCAATATATCAAATGTGATAAGAAGTGCCACAAAAGATGTGGAGATGATGAC
AAAATTGATGGAAACGTTGGTTGAAAGTGATGAAATTTACTAGCAAGCTATTATTATATGGAGTTCCATAAATTTACTTCTCTCTTCGATAATAA
ACTTTACTTGTACTATGACTTTTTACTATAAGATGCATTGTATGATGATGAAACTATGTACTACTATTTGATATTATAATTGTTAATTCAATAAA
CAAAATTAGTCGAGTCAAAAAAAA
Unigenes |
Current Unigene builds | |||||
[SGN-E372913] | SGN-U579387 | Tomato 200607 | Build 2 | 57 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T186066 [Download][View] | Facility Assigned ID: FA0AAD20CD08RM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.941 | Expected Error Rate: 0.0000 | Quality Trim Threshold: 12.5 |