EST details — SGN-E372951

Search information 
Request: 372951Match: SGN-E372951
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C179865Clone name: TUS-32-N23
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C179865 is on microarray TOM1 spot ID 1-1-2.2.1.21 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C86798 [cLET-44-F14] Trace: SGN-T111362 EST: SGN-E298726 Direction: 5' Facility: TIGR
Clone: SGN-C179865 [TUS-32-N23] Trace: SGN-T186103 EST: SGN-E372950 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E372951Length: 597 bp (872 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E372951 [] (trimmed) GAACAAAACAGTCTTGAGGAGCAGCTATAAGCATTTATGCAGTTTGATTTGGCTACATTACATGCTTCATCATCAAATATCTATAGATTTTGGTA
GACACTTAATAGACGTATCCCTTCACGAACATTCCCTTCTTGGCCTCATCGGACTCACCTTCACCGGTGTATTTCCCTAGCTGGGCAAGAGAGTT
GGCCTTTGCTCTAACAAGCAAGGCATCCTGAGCTGCCTTCACATTTTCTGGCCTTCCACTCCAAGTCTTGAGGCATGTGTTCTGAAGGGCTCTGG
CGTATGAGAACGACACGTGCCATGGGTTGGGACTTTGGTTCATGGCGTTCAAGTTAAGAGTTGCCTCAACTTCAGATTGTCCACCAGACAAAAAC
ATGATTCCTGGGACGGCAGGAGGGATTCTTTGGCGGAGGAGACTGAGGGTGTAGTCAGCAACTTGCTGTGGGGTGGCCCTGTCCTTGCACTCAGC
TCCAGGGGTGACCATGCTGGGCTTCAACAAGATACCTTCAAACATGACATTGTTCTGGGCAAGGTAGAAGAAAACTTCAGCCCACACCTGCTTGG
CGACTTTCAAGGTCCTATCAATGTTGT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E372951] SGN-U580022 Tomato 200607 Build 2 373 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T186104 [Download][View] Facility Assigned ID: FA0AAD20CG12RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.971 Expected Error Rate: 0.0034 Quality Trim Threshold: 14.5