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EST details — SGN-E372978

Search information 
Request: 372978Match: SGN-E372978
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C179615Clone name: TUS-32-D13
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C179615 is on microarray TOM1 spot ID 1-1-4.4.1.14 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C80051 [cLET-11-B4] Trace: SGN-T105370 EST: SGN-E292907 Direction: 5' Facility: TIGR
Clone: SGN-C179615 [TUS-32-D13] Trace: SGN-T186130 EST: SGN-E372977 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E372978Length: 560 bp (921 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E372978 [] (trimmed) AAACATGAAGGATAAATATTCTCAAATATCTAATAAACACGAACCAAAGTCAAGTCTAGTGCGCTCGCACATAGCAATTGTGAAGCACAGTACAA
AATTGACGACCACATTCAGTTGTTGCAGCTCGATAATGAACTAAAACAAGATAAACCAAGTCTTCTTTCAACAACTACATAAATCAAGAAAAGAG
GGCCTGACAGACTGGAATTCAGAAGAATTACTGCTCCTTGGTGTAGTGTCGTACCGTAAAGGCCAAGCCCAGGATCAAGATGGGTACAAGGAACT
GTAGGATTTTGATAATGAATTCTGGAGTCTTGTCTGGATTGTATGCTGTTTGTTCTGATGGAATATAAGCACGTTTTAGGGGAACAGTTGACATG
TCGATTTCCCCAATGTAATACTTATCCATCATCTCTCTAGCAGAATCACTGTGGCCAACATCTTCAAAGTCATTTGTTGCATCCTTCCCAGTTGC
TGAAAGCAAAACTTCATCACCACCTGGATGATCATCCATGAACGGAGTTGACATTCATACACCCTTTCCGCTTGATGATGAGCCC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E372978] SGN-U581041 Tomato 200607 Build 2 34 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T186131 [Download][View] Facility Assigned ID: FA0AAD20CB07RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.972 Expected Error Rate: 0.0085 Quality Trim Threshold: 14.5