EST details — SGN-E372991

Search information 
Request: 372991Match: SGN-E372991
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C179671Clone name: TUS-32-F21
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C179671 is on microarray TOM1 spot ID 1-1-4.2.1.19 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C80177 [cLET-11-H20] Trace: SGN-T105392 EST: SGN-E292929 Direction: 5' Facility: TIGR
Clone: SGN-C179671 [TUS-32-F21] Trace: SGN-T186145 EST: SGN-E372992 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E372991Length: 644 bp (892 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E372991 [] (trimmed) GGACAAAAGGGCTCTTTGCATTGCACAATTTGATGACCAAAACACAAAAATCATCAATTGTAAATTTTACAAGAAAAAGAAAAGAAAACAAAGTT
CCGTATACATGATTGAGTTCTAGCCATTTTAAGCAAACTTAACCCTTGTATTATTACTCGATGATGAACTCCTACCCCTGAATCCAACAACATTT
AGTTTTTTTGGGGAGACACTGGAGCTTCGGCTATTTACTCGTCTTTTTCCTGTTGAACTGCTGGTCTTTTTGGACACTTTCATAGCTATCTTTGG
TTTTGACTTAGCTGGTACTTTACCAAACTTGGTTCCTGGGGATCTTTTAAAATCGGTAGTCTTTGGAGATCTTTTTGAATCGGTAGTCTTTGCAG
ACCTTTTTGAATCGATAGTCTTCCTTGTAACACTAAAGGATTTGCCTGTGGAAGCTGTAGCCTTGCCTTTTGAATTTGAAACTTTCACCGACTTT
TCACGCTTGTCCTTCTGTTCAGTAATGCGAGACCTGGCATTGTCTTTTTTGATACCGTTTACCGAAAGAGACTCCAAGCTCTCATTCTTCTTTAT
GGCTTCCTCAATGCAATTGGCCAAAAGTAAGTCCTTTTTGGCAATTAAACTTGTTACTTTCCCTTTGGCACCCA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E372991] SGN-U584774 Tomato 200607 Build 2 2 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T186144 [Download][View] Facility Assigned ID: FA0AAD20CC11FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.939 Expected Error Rate: 0.0171 Quality Trim Threshold: 14.5