EST details — SGN-E372998

Search information 
Request: 372998Match: SGN-E372998
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C179711Clone name: TUS-32-H13
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C179711 is on microarray TOM1 spot ID 1-1-4.4.1.15 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C80275 [cLET-11-L9] Trace: SGN-T105193 EST: SGN-E292730 Direction: 5' Facility: TIGR
Clone: SGN-C179711 [TUS-32-H13] Trace: SGN-T186150 EST: SGN-E372997 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E372998Length: 560 bp (909 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E372998 [] (trimmed) TTCAAACACCATTTCTGAGCTCCACCAAACTTCATAATTTTCCATTTTTTCTCTAAACAATAAACAAAAATGGAAATTACAGAGCTTAAACTGAT
GATTAACATCATAATTATCTTCTTCTTCTTCCTTAATTTTTCTCCAGTTTCCTCTGTTGATGTCTGCAACCCAACTTCATGCTCAGAAATGGGTA
TCGGACCGGAAATCCGGTTCCCTTTCCGGTTAAAAGACCGGCAATCGGACCGGTGCGGTTACCCCGGTTTCGATCTTTCGTGCAATGAAAGAGGC
CAAACAATCATGTCACTTCCTCATTCAGGTGATTTTTTAGTTACAGAGATTGATTACTCTGCTCAATCTGTAATGCTTTATGATCCAGATTTCTG
CCTTGTCAAACGACTCATCGGTTTTAATGTCACAAATTCGCCATTCAAAGCTGATCATCAACGAAATTACACAATCGTCAGGTGTACTTCAGATG
ACTGGTTAAGTTACCCAAATTATCAAGGTAGCGATTCCGTTGTATTGCCGGGGAGTTACTAACAAAAATGAGGCGATTTTGGCTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E372998] SGN-U567831 Tomato 200607 Build 2 4 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T186151 [Download][View] Facility Assigned ID: FA0AAD20CD07RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.962 Expected Error Rate: 0.0068 Quality Trim Threshold: 14.5