EST details — SGN-E373039
Search information |
Request: 373039 | Match: SGN-E373039 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C179909 | Clone name: TUS-32-P19 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C179909 is on microarray TOM1 spot ID 1-1-6.4.1.21 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C86911 [cLET-44-L12] | Trace: SGN-T111376 | EST: SGN-E298740 | Direction: 5' | Facility: TIGR |
Clone: SGN-C179909 [TUS-32-P19] | Trace: SGN-T186191 | EST: SGN-E373038 | Direction: 3' | Facility: INRA |
Sequence |
Sequence Id: SGN-E373039 | Length: 396 bp (894 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E373039 [] (trimmed)
GAATTCTGCAACCGCCAGAAGGCAGGCCCTTGTTAGTGTTGCCATCACTCGGACCGAAACCACGACTTGAATTTGAATCAGTAGGGGCCTTGCTG
ATGATCCGGAGGCATTTGCTGAGTTGAAGGTCAAGGAAATCAAGAATGGACGATTAGCTATGTTCTCGATGTTTGGTTTCTTTGTTCAAGCTATT
GTTACTGGAAAAGGTCCAATTGAGAACCTTTCCGACCACATTGCTGATCCAGTTGCCAACAATGCTTGGGCTTACGCCACAAACTTTGTACCCGG
AAAATGAACTTAGTACACTCTTTTATCTGTAAAAATTGTGAAGCTACTGCATGTCTTTTATGTAATCATATATATGCAAAAGCCAAGACTACATA
ATCTTCAAATTTAATC
ATGATCCGGAGGCATTTGCTGAGTTGAAGGTCAAGGAAATCAAGAATGGACGATTAGCTATGTTCTCGATGTTTGGTTTCTTTGTTCAAGCTATT
GTTACTGGAAAAGGTCCAATTGAGAACCTTTCCGACCACATTGCTGATCCAGTTGCCAACAATGCTTGGGCTTACGCCACAAACTTTGTACCCGG
AAAATGAACTTAGTACACTCTTTTATCTGTAAAAATTGTGAAGCTACTGCATGTCTTTTATGTAATCATATATATGCAAAAGCCAAGACTACATA
ATCTTCAAATTTAATC
Unigenes |
Current Unigene builds | |||||
[SGN-E373039] | SGN-U578647 | Tomato 200607 | Build 2 | 6 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T186192 [Download][View] | Facility Assigned ID: FA0AAD20CH10RM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.967 | Expected Error Rate: 0.0000 | Quality Trim Threshold: 12.5 |