EST details — SGN-E373175

Search information 
Request: 373175Match: SGN-E373175
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C179737Clone name: TUS-32-I15
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C179737 is on microarray TOM1 spot ID 1-1-2.1.1.16 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C80334 [cLET-11-O21] Trace: SGN-T105291 EST: SGN-E292828 Direction: 5' Facility: TIGR
Clone: SGN-C179737 [TUS-32-I15] Trace: SGN-T185839 EST: SGN-E373176 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E373175Length: 550 bp (926 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E373175 [] (trimmed) GATGTGAACATAATCTCCAATTTCAAAGCAAATAAGTTAGCTGCTATGGTTTTTTACATGTTTTACATGTTCAAGCATTAATGTAAATATTGTAC
AAAAGGGAACAATTTCAGCCTCTGTATTTGGCAGGGCTAAAATACAACTAATACATCGACAGTAAAAAAAGAACCTTTGTTCTTTTAGCTTTTGC
AACTTACAAAGTACAATGTCATCATCAGCAACAGCGTTTAACATGCCAGCTGAGCAAAGCCATTTATACTAGCTCCGGAGGAGGAGTTGTGACCT
GGCCAGTTGGTGTTGCAACATGGGTAGTTGGGTTTGCTGGTGCTGCTGAAGGTTCTGCTGCCTGTGCAGGTCCTGGTGCTATTGTTACATGCAAG
CCCCTATGTTGCCCTGCTTGCAGCATGAAAGCAACCTCTGCTGCCGCTAGTGCTGCAGCCTCCTGTCTTTGCCTTCGACGCTGCATGATACTTAT
AGCCCAAGCCATGATGTAGCAAGGTAGAAGAAAACCAGCAGCACGGAGTAAGAAAAGCGAGAAAAAAGCAAAAAC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E373175] SGN-U576622 Tomato 200607 Build 2 14 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T185838 [Download][View] Facility Assigned ID: FA0AAD20AE08FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read -- flanking 5' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.963 Expected Error Rate: 0.0060 Quality Trim Threshold: 12.5