EST details — SGN-E373399

Search information 
Request: 373399Match: SGN-E373399
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C179192Clone name: TUS-31-B22
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C179192 is on microarray TOM1 spot ID 1-1-3.2.2.15 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C179192 [TUS-31-B22] Trace: SGN-T185538 EST: SGN-E373400 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E373399Length: 718 bp (880 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E373399 [] (trimmed) TTAATCTCGATACCAATAATTAACATACCAAGTACAAAAAGTAATATCTAACCTATATATACAATATAATTTTCCAGCAAACCCCATGTCAAACC
CCCTATGTAAATGGTGGAAACTGAAGCGAGGCGGCAAAGACACTCACTAAGCTGCTGGCAGCTGAACACTTAAAAGATGGAGGACTGAGGTTCAC
TTGGAAATGTGTTTCATCAAGTCCAAGAAAGTGAATATGTCATAGGTAGAAAGTAAACAATGTCAGAAAAGCCCTAGTAGCACATTCATCATATC
ACTAGTTTTCATATCACTAGACCATACCAGCCTACTTTATTTCCCAACTAGCAAGAACACTTAGCAAGATTTCATATGACTGTCCCATCTTTAAT
GGTTGCATTCTTCATTATGACGGTAATCCCGGACCTAATGTAAAATCCTTCTGCTGACCTATCAGCTTCTTCAACACCTTGCTTGTTCAGAATAA
CCACATCTTTTCCTATCTTTGCGTTCTTGTCAATTATGCATTTCTGTATCTTAGTGTTTGGCCCGACCCCTATTGGAACCTTTCCTTCTGCTAAT
AGTGAAGCAATCTCGGATTCAGTTTGATAATAATCTGCACCCATCATCATGGTATCCTTAAACTCAACACCATAGTCTAAGCGTGATCGTACACC
AACTATGGAGTGCTGAATGTTACATTCCCTCAGAAAGCAGCCATGTGAAATTA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E373399] SGN-U581813 Tomato 200607 Build 2 8 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T185537 [Download][View] Facility Assigned ID: FA0AAD19DA11FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.960 Expected Error Rate: 0.0031 Quality Trim Threshold: 14.5