EST details — SGN-E373421

Search information 
Request: 373421Match: SGN-E373421
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C179282Clone name: TUS-31-F16
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C179282 is on microarray TOM1 spot ID 1-1-1.2.2.12 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C77236 [cLES-20-F23] Trace: SGN-T102254 EST: SGN-E290575 Direction: 5' Facility: TIGR
Clone: SGN-C179282 [TUS-31-F16] Trace: SGN-T185560 EST: SGN-E373422 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E373421Length: 629 bp (913 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E373421 [] (trimmed) GGAACAAAGTACATAGCCTGAAACTCAATATTCAAAATGAATATACCAAGGAACTTCCGTTCAAAAGTTTCCATAGAACTCATATAAAGACTCAA
GACTGAGAAATATTCAAAACTAGGTAATCGATTTAGATAATTCCAATTTTGTTGGCCACATCCAAAGCATCATAGTCGGGTGTCAACCTCACATA
AGCCTTCTTTGTCCCATCAGGCCTGATCAAGGTATTGACTTTCTTTATCTGGATGTCATACATTTTCTTCACTGCATCTTTTATCTTCTTCTTGT
CAGCATGAATGTCAACAATGAAAACAAGGGTATTGTTGTCCTCAATCTTCTTCATTGCAGACTCGGTCGTAAGAGGACATTTTAGAACCTGGTAC
TGATCAAGTCTGTTCCTTCCAGGTGCACTAATGCGAGGGTACTTGGGATTCCTATCCTTCTTCAATGTCTTAGGTCGATGGAAAGTAACTTTTGT
CCTTATCTTACTTGACTTCTTCTTAAAGGTTGATCCAGACTTAACAGCCTTGGCAGCCTTGACAGCCTGGGCTTTGGGGTCTTTCTTTTTTGTTA
AGTCCACTTTAGCTGGAGCCATAGCTAAATACAATGCGAAAAATCCAATACGAACTGAC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E373421] SGN-U577327 Tomato 200607 Build 2 22 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T185559 [Download][View] Facility Assigned ID: FA0AAD19DC08FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read -- flanking 5' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.966 Expected Error Rate: 0.0029 Quality Trim Threshold: 12.5