EST details — SGN-E373506
Search information |
Request: 373506 | Match: SGN-E373506 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C179286 | Clone name: TUS-31-F20 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C179286 is on microarray TOM1 spot ID 1-1-5.2.2.16 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C77243 [cLES-20-F8] | Trace: SGN-T102128 | EST: SGN-E290449 | Direction: 5' | Facility: TIGR |
Clone: SGN-C179286 [TUS-31-F20] | Trace: SGN-T185645 | EST: SGN-E373507 | Direction: 5' | Facility: INRA |
Sequence |
Sequence Id: SGN-E373506 | Length: 723 bp (896 bp untrimmed) |
Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E373506 [] (trimmed)
CGGAAAATTTCCCCTATCATAATTGGGAGTTTATGTGTATACTGTTATGACAAACATATACATAAAAAGAACCTCGCTGAACAGTGAGAGTTACA
CAAGCATAAAGAACCTCGTGACAACTGGAAAAAGAGCTGATGGCGTTCCGCGCAATCAATGGAATATTATCAGACATTTCCGTGGGATATGTGGT
TAGGCACCTCTCCCTGATTATCCAAAGGCATGTACTGTGCCATGATGGCACGGATCTCTGAATCCATATATCTCCGGATCCTATACTTGTACACG
GCATATGCTCCAGCTCCTGCAACTGCCAAACCCAAGATGATAACCCAAACAAGACCCCAGCTAAATGCTGCTTTTCCATCATTGCCTGCAGCTAT
ACACGTGTCATGTTCTTGCATGTACAATAAATTGCCGCTGCAACTGCATTGATAACCACCCCAGGTATTCTTGCATTTACAATCTGGACACTGGC
ATGCCAGCCTTTCTTTGCATTCATCAATATCTTCACAAAGATTCACTCCATCTCCTTTGAACCCTGGTGGACATTTACAACCCTTTGTGTGGTCA
TCTATGCAGGCAGAATATGTCCTTCCATCCTTGGTTCCCTTCCAACAACCTCCGTTGTTTAATCCACAGCGTAATGCTCCAGATGCTTCACAGTG
AGAATAACCATCACCAAACAAATTTACTTCCTGAACCGTCGGGCACTCACAGACTTTC
CAAGCATAAAGAACCTCGTGACAACTGGAAAAAGAGCTGATGGCGTTCCGCGCAATCAATGGAATATTATCAGACATTTCCGTGGGATATGTGGT
TAGGCACCTCTCCCTGATTATCCAAAGGCATGTACTGTGCCATGATGGCACGGATCTCTGAATCCATATATCTCCGGATCCTATACTTGTACACG
GCATATGCTCCAGCTCCTGCAACTGCCAAACCCAAGATGATAACCCAAACAAGACCCCAGCTAAATGCTGCTTTTCCATCATTGCCTGCAGCTAT
ACACGTGTCATGTTCTTGCATGTACAATAAATTGCCGCTGCAACTGCATTGATAACCACCCCAGGTATTCTTGCATTTACAATCTGGACACTGGC
ATGCCAGCCTTTCTTTGCATTCATCAATATCTTCACAAAGATTCACTCCATCTCCTTTGAACCCTGGTGGACATTTACAACCCTTTGTGTGGTCA
TCTATGCAGGCAGAATATGTCCTTCCATCCTTGGTTCCCTTCCAACAACCTCCGTTGTTTAATCCACAGCGTAATGCTCCAGATGCTTCACAGTG
AGAATAACCATCACCAAACAAATTTACTTCCTGAACCGTCGGGCACTCACAGACTTTC
Unigenes |
Current Unigene builds | |||||
[SGN-E373506] | SGN-U574304 | Tomato 200607 | Build 2 | 32 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T185644 [Download][View] | Facility Assigned ID: FA0AAD19DC10FM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.977 | Expected Error Rate: 0.0045 | Quality Trim Threshold: 14.5 |