EST details — SGN-E373769
Search information |
Request: 373769 | Match: SGN-E373769 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C179308 | Clone name: TUS-31-G18 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C179308 is on microarray TOM1 spot ID 1-1-7.3.2.16 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C77311 [cLES-20-I9] | Trace: SGN-T102010 | EST: SGN-E290331 | Direction: 5' | Facility: TIGR |
Sequence |
Sequence Id: SGN-E373769 | Length: 702 bp (898 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E373769 [] (trimmed)
TTAAAATAAACACAAATGGCAGCTGCTACAATGGCTCTTTCTTCCCCTTCATTTGCTGGACAGGCAGTCAAACTCTCACCATCTGCCTCAGAAAT
TTCTGGAAATGGAAGGATCACTATGAGAAAGGCTGTTGCCAAGTCCGCCCCATCTAGCAGCCCATGGTATGGCCCTGACCGTGTTAAGTACTTGG
GCCCATTCTCTGGTGAGTCCCCAAGCTACTTGACCGGTGAATTCCCTGGTGATTACGGGTGGGATACCGCTGGACTTTCAGCAGACCCTGAAACT
TTTGCCAAGAACCGTGAACTTGAGGTGATCCACTGCAGATGGGCTATGCTTGGTGCTCTTGGATGTGTCTTCCCTGAGCTCTTGGCCCGTAATGG
TGTCAAGTTCGGTGAGGCTGTGTGGTTCAAGGCCGGATCCCAGATCTTCAGTGAAGGTGGACTTGACTACTTGGGCAACCCAAGCTTGGTCCATG
CACAAAGCATCTTGGCCATCTGGGCTTGCCAAGTTGTGTTGATGGGAGCTGTTGAGGGATACCGTATTGCTGGTGGACCTCTTGGTGAGGTTGTC
GACCCACTCTACCCTGGTGGCAGCTTCGACCCATTAGGCCTTGCTGAAGACCCAGAGGCATTTGCTGAGCTCAAGGTAAAGGAGATCAAGAACGG
TAGACTTGCTATGTTCTCTATGTTTGGATTCTTTGTT
TTCTGGAAATGGAAGGATCACTATGAGAAAGGCTGTTGCCAAGTCCGCCCCATCTAGCAGCCCATGGTATGGCCCTGACCGTGTTAAGTACTTGG
GCCCATTCTCTGGTGAGTCCCCAAGCTACTTGACCGGTGAATTCCCTGGTGATTACGGGTGGGATACCGCTGGACTTTCAGCAGACCCTGAAACT
TTTGCCAAGAACCGTGAACTTGAGGTGATCCACTGCAGATGGGCTATGCTTGGTGCTCTTGGATGTGTCTTCCCTGAGCTCTTGGCCCGTAATGG
TGTCAAGTTCGGTGAGGCTGTGTGGTTCAAGGCCGGATCCCAGATCTTCAGTGAAGGTGGACTTGACTACTTGGGCAACCCAAGCTTGGTCCATG
CACAAAGCATCTTGGCCATCTGGGCTTGCCAAGTTGTGTTGATGGGAGCTGTTGAGGGATACCGTATTGCTGGTGGACCTCTTGGTGAGGTTGTC
GACCCACTCTACCCTGGTGGCAGCTTCGACCCATTAGGCCTTGCTGAAGACCCAGAGGCATTTGCTGAGCTCAAGGTAAAGGAGATCAAGAACGG
TAGACTTGCTATGTTCTCTATGTTTGGATTCTTTGTT
Unigenes |
Current Unigene builds | |||||
[SGN-E373769] | SGN-U579099 | Tomato 200607 | Build 2 | 204 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T185211 [Download][View] | Facility Assigned ID: FA0AAD19BD09RM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.975 | Expected Error Rate: 0.0037 | Quality Trim Threshold: 14.5 |