Notice: Due to a regional power outage, SGN was briefly unavailable on Saturday, Feb 4. We apologize for the inconvenience.

EST details — SGN-E373829

Search information 
Request: 373829Match: SGN-E373829
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C179202Clone name: TUS-31-C8
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C179202 is on microarray TOM1 spot ID 1-1-1.3.2.7 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C76677 [cLES-18-M21] Trace: SGN-T101677 EST: SGN-E289235 Direction: 5' Facility: TIGR
Clone: SGN-C179202 [TUS-31-C8] Trace: SGN-T185272 EST: SGN-E373830 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E373829Length: 667 bp (902 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E373829 [] (trimmed) GAAGTTAAAATGCTTAAAATAAATATGTGAAAAGAAGCTTGCCTGACTATATGGAACAAAGTACATAGCTGAAACTCAATATTCAAAATGAATAT
ACCAAGGAACTTCCGTTCAAAAGTTTCCATAGAACTCATATAAAGACTCAAGACTGAGAAATATTCAAAACTAGGTAATCGATTTAGATAATTCC
AATTTTGTTGGCCACATCCAAAGCATCATAGTCGGGTGTCAACCTCACATAAGCCTTCTTTGTCCCATCAGGCCTGATCAAGGTATTGACTTTCT
TTATCTGGATGTCATACATTTTCTTCACTGCATCTTTTATCTTCTTCTTGTCAGCATGAATGTCAACAATGAAAACAAGGGTATTGTTGTCCTCA
ATCTTCTTCATTGCAGACTCGGTCGTAAGAGGACATTTTAGAACCTGGTACTGATCAAGTCTGTTCCTTCCAGGTGCACTAATGCGAGGGTACTT
GGGATTCCTATCCTTCTTCAATGTCTTAGGTCGATGGAAAGTAACTTTTGTCCTTATCTTACTTGACTTCTTCTTAAAGGTTGATCCAGACTTAA
CAGCCTTGGCAGCCTTGACAGCCTGGGCTTTGGGGTCTTTCTTTTTTGTTAAGTCCACTTTAGCTGGAGCCATAGCTAAATACAATGCGAAAAAT
CC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E373829] SGN-U577327 Tomato 200607 Build 2 22 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T185271 [Download][View] Facility Assigned ID: FA0AAD19BB04FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read -- flanking 5' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.964 Expected Error Rate: 0.0006 Quality Trim Threshold: 12.5