EST details — SGN-E374034
Search information |
Request: 374034 | Match: SGN-E374034 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C180073 | Clone name: TUS-33-G15 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C93245 [cLEX-14-C12] | Trace: SGN-T118066 | EST: SGN-E305580 | Direction: 5' | Facility: TIGR |
Clone: SGN-C180073 [TUS-33-G15] | Trace: SGN-T186485 | EST: SGN-E374033 | Direction: 3' | Facility: INRA |
Sequence |
Sequence Id: SGN-E374034 | Length: 430 bp (934 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E374034 [] (trimmed)
GGTTTTCTTCCTCTCTCTTCCAATCAACCCTAACTTTAGAGAGAGAAAGAAAAAGGCTACTCTTCCACCATGTTGGTTTATCAGGATCTCCTCAC
CGGTGATGAGCTTCTCTCTGACTCATTTCCCTACAAAGAAGTCGAGAATGGCGTGCTTTGGGAAGTTCAAGGGAAGTGGGTTGTTCAAGGTGCCG
TCGATGTAAACATTGGGGCAAATCCTTCTGCTGAGGGTGGATGTGAAGATGAAGGTGTGGATGACCAACCTGTCAGGGTTGTCGATATTGTTGAC
ACTTTTAGACTACAGGAGCAACCTGCTTTTGACTAGAAACATTTTGTTACCTTCATGAAGAGATACTTCAAGAGCCTGATACCCATGCTAGAAGG
AGAAACACAGGAAGCATTTAGAAACATCATTGAACCAGCAGCTAAGTTTC
CGGTGATGAGCTTCTCTCTGACTCATTTCCCTACAAAGAAGTCGAGAATGGCGTGCTTTGGGAAGTTCAAGGGAAGTGGGTTGTTCAAGGTGCCG
TCGATGTAAACATTGGGGCAAATCCTTCTGCTGAGGGTGGATGTGAAGATGAAGGTGTGGATGACCAACCTGTCAGGGTTGTCGATATTGTTGAC
ACTTTTAGACTACAGGAGCAACCTGCTTTTGACTAGAAACATTTTGTTACCTTCATGAAGAGATACTTCAAGAGCCTGATACCCATGCTAGAAGG
AGAAACACAGGAAGCATTTAGAAACATCATTGAACCAGCAGCTAAGTTTC
Unigenes |
Current Unigene builds | |||||
[SGN-E374034] | SGN-U592820 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T186486 [Download][View] | Facility Assigned ID: FA0AAD21AD08RM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.958 | Expected Error Rate: 0.0097 | Quality Trim Threshold: 14.5 |