EST details — SGN-E374519
Search information |
Request: 374519 | Match: SGN-E374519 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C182064 | Clone name: TUS-38-J14 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C182064 is on microarray TOM1 spot ID 1-1-3.2.10.13 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C83928 [cLET-26-L10] | Trace: SGN-T108915 | EST: SGN-E296863 | Direction: 5' | Facility: TIGR |
Clone: SGN-C182064 [TUS-38-J14] | Trace: SGN-T187790 | EST: SGN-E374520 | Direction: 5' | Facility: INRA |
Sequence |
Sequence Id: SGN-E374519 | Length: 688 bp (916 bp untrimmed) |
Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E374519 [] (trimmed)
ACGCCAGAAAATCTTCATCTATTATCAACAAATAATTGTTTATGAGAAGGTTCTAAGTTCATTTTTTTTTTTACAATTAACAAACAGCTGGATGC
ACCTCTCTTTCCAATCCGGTGTTTCTGTAAATATAATCTGAAAAATCACACAAACAAAAGAATTAATACAACCAAGAAACTTAATTCCCACTGCA
TCTTATTTTGAAGCCCTAAAAAGTTGACTTCCAAGTGTCACAACAGGAGTTCCTTCTCCCATGATTGTTGTCAAGCTCATTTCTTTCTCCAGTAT
CCGGTCCAGTTCCATCACCACGTAACTCATGGTAGGCCGCTTTTCACTCGAAGAGTCAACGCACCGGACAGTCAATTGCATGAACTCTTCCATGC
CTTCTCTGGTGAAGCTATTGCCCAATCTTGGATCAATGATGGCAGATATGTTTCCAGATTCTTGATAATTCTCTACCCATTCAACTATGTTTACA
TTCAACTCTGAAGATAGCAAATCCATTGCTTCATGGCCGCTAACTAGCTCCAGCAGAAAAATACCAAAACTGTAGGCATCACTTTTCTCAGAAAA
TCGTCGGAACTCTCTGACCTCTGGGGCAAGAAATATTTCATCAGCAGCCACTCGAGAAGATGGGCCTGCAACCTCGAATCTTCCAAGAAAATTGC
GTAATCCTGCATCTGCAACTTTA
ACCTCTCTTTCCAATCCGGTGTTTCTGTAAATATAATCTGAAAAATCACACAAACAAAAGAATTAATACAACCAAGAAACTTAATTCCCACTGCA
TCTTATTTTGAAGCCCTAAAAAGTTGACTTCCAAGTGTCACAACAGGAGTTCCTTCTCCCATGATTGTTGTCAAGCTCATTTCTTTCTCCAGTAT
CCGGTCCAGTTCCATCACCACGTAACTCATGGTAGGCCGCTTTTCACTCGAAGAGTCAACGCACCGGACAGTCAATTGCATGAACTCTTCCATGC
CTTCTCTGGTGAAGCTATTGCCCAATCTTGGATCAATGATGGCAGATATGTTTCCAGATTCTTGATAATTCTCTACCCATTCAACTATGTTTACA
TTCAACTCTGAAGATAGCAAATCCATTGCTTCATGGCCGCTAACTAGCTCCAGCAGAAAAATACCAAAACTGTAGGCATCACTTTTCTCAGAAAA
TCGTCGGAACTCTCTGACCTCTGGGGCAAGAAATATTTCATCAGCAGCCACTCGAGAAGATGGGCCTGCAACCTCGAATCTTCCAAGAAAATTGC
GTAATCCTGCATCTGCAACTTTA
Unigenes |
Current Unigene builds | |||||
[SGN-E374519] | SGN-U598659 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T187789 [Download][View] | Facility Assigned ID: FA0AAD26DE07FM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.961 | Expected Error Rate: 0.0022 | Quality Trim Threshold: 14.5 |