EST details — SGN-E374575
Search information |
Request: 374575 | Match: SGN-E374575 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C173189 | Clone name: TUS-15-H19 |
| ||
Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C173189 is on microarray TOM1 spot ID 1-1-6.4.19.1 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C1808 [cLEC-13-P2] | Trace: SGN-T26047 | EST: SGN-E204294 | Direction: 5' | Facility: TIGR |
Clone: SGN-C173189 [TUS-15-H19] | Trace: SGN-T188806 | EST: SGN-E374576 | Direction: 5' | Facility: INRA |
Sequence |
Sequence Id: SGN-E374575 | Length: 736 bp (910 bp untrimmed) |
Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E374575 [] (trimmed)
ATGGATTTACCCCTTCAAAATAAATAAACATCCCATGAGTTGTAACAAGAATTCTTTTGTTTGGGAAAACTATCTTTGTTCATTTTTTTAAGGCT
GTATTCTTACAAATAGGACACACATTCTTCAGCATTAGCCACTGCTTGATGCAACTACTATGGAATTCATGTCCACAATCCAATATGCCCATGTA
ATCTCCACTTGTGTATTCCTCCCGACAGATACAGCAAGGCTCCATATTTGACGATGACCCTCCAGATATTGAATCATGCTTTCGCCGTCTCATAC
GTTTCAAAATGGTTCCTTCACTCAATCCGGTGTTCACATTTCCTATACGTTCTTCCAATGCCAATAATTCCTCATATGACATGTTATCAACATCG
AGCCTCATGCCTCTATGTGTATCATGAATTTCTGCAGCGCCGTTGAGAAATGAATCAAGCATCATATAATCCTCAGATTGCCTGTTCTCGCCTCT
CCGCATGGAATGTAGGACATGACGAATCAGTCTGTGGCGACCCTCGATATCAGAAGCTAAACCACGCGATCCACCCACTTCATTACTTGGAAAAT
TGGTCATTAAAGATGATATTAGGTGGTTTCGATGATTACGTCGGCTACTAGATCCCTGGCTACTAGATCGCAATGATATCTCTGCCTCCTCCACG
GGAGAAGCAGCTGATGATAGCAGGGAAAAATTACCTCTCTGACTTTCAAAGTCCGACTCAACAGGAGGTAG
GTATTCTTACAAATAGGACACACATTCTTCAGCATTAGCCACTGCTTGATGCAACTACTATGGAATTCATGTCCACAATCCAATATGCCCATGTA
ATCTCCACTTGTGTATTCCTCCCGACAGATACAGCAAGGCTCCATATTTGACGATGACCCTCCAGATATTGAATCATGCTTTCGCCGTCTCATAC
GTTTCAAAATGGTTCCTTCACTCAATCCGGTGTTCACATTTCCTATACGTTCTTCCAATGCCAATAATTCCTCATATGACATGTTATCAACATCG
AGCCTCATGCCTCTATGTGTATCATGAATTTCTGCAGCGCCGTTGAGAAATGAATCAAGCATCATATAATCCTCAGATTGCCTGTTCTCGCCTCT
CCGCATGGAATGTAGGACATGACGAATCAGTCTGTGGCGACCCTCGATATCAGAAGCTAAACCACGCGATCCACCCACTTCATTACTTGGAAAAT
TGGTCATTAAAGATGATATTAGGTGGTTTCGATGATTACGTCGGCTACTAGATCCCTGGCTACTAGATCGCAATGATATCTCTGCCTCCTCCACG
GGAGAAGCAGCTGATGATAGCAGGGAAAAATTACCTCTCTGACTTTCAAAGTCCGACTCAACAGGAGGTAG
Unigenes |
Current Unigene builds | |||||
[SGN-E374575] | SGN-U581978 | Tomato 200607 | Build 2 | 5 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T188805 [Download][View] | Facility Assigned ID: FA0AAD3CD10FM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.977 | Expected Error Rate: 0.0062 | Quality Trim Threshold: 14.5 |