EST details — SGN-E374595

Search information 
Request: 374595Match: SGN-E374595
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C173285Clone name: TUS-15-L19
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C173285 is on microarray TOM1 spot ID 1-1-6.4.19.2 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C1974 [cLEC-14-H16] Trace: SGN-T26351 EST: SGN-E204735 Direction: 5' Facility: TIGR
Clone: SGN-C173285 [TUS-15-L19] Trace: SGN-T188826 EST: SGN-E374596 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E374595Length: 580 bp (919 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E374595 [] (trimmed) AAAAACAAAAAAAAAACATATTAATTTATTTTAGTTGGCTAACAATCTATCAAAATAAAACCACAAACACATGAAAGAATTTCACCCAAAAAAAA
AAAACAAAAAAAAAACTACTTAACCCTTTCAAAATTTTTTACATTTTGGAGGAAAACCTTGAGGAAACCTTTTAATATCAGTCCAATAATTATAA
ATCATGAAATTTTTTTGAACCCATTTAAGTTTTTTTTTGCCATTAAAATCAAGTTCTTGATTTTGCCATTTTTGATCAAAAAATTGGGATGGGCT
AAAGCTTTGGGCCATGTAGTTTCTATAGTAGGCTGGGAAGGGGGCTTGGGCCCAATCAGTTTTTACTAGGCCTCCTTTTGGGGCCCAATCATCAG
CATTCCAAAGGCTTGAGTAAATCCTCATGGGCTGATTTTTTGGAAATGGTACACCAACTGATTCAGCATTTTTGTATACTTTTATTGGGGTGTTG
TCCACCAAAAATATGATGTGTTGGGGTTTCCAAATGATGGAGTAGGGGGGGAAGTTCTTTGTAGGGTCAAACCAAAGGTAAAATTGTTGCTTTTT
GTTCCCTTGC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E374595] SGN-U579477 Tomato 200607 Build 2 5 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T188825 [Download][View] Facility Assigned ID: FA0AAD3CF10FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.903 Expected Error Rate: 0.0134 Quality Trim Threshold: 14.5