EST details — SGN-E374619
Search information |
Request: 374619 | Match: SGN-E374619 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C173081 | Clone name: TUS-15-D7 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C173081 is on microarray TOM1 spot ID 1-1-2.4.20.13 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C1508 [cLEC-13-A15] | Trace: SGN-T26054 | EST: SGN-E204301 | Direction: 5' | Facility: TIGR |
Clone: SGN-C173081 [TUS-15-D7] | Trace: SGN-T188848 | EST: SGN-E374618 | Direction: 3' | Facility: INRA |
Sequence |
Sequence Id: SGN-E374619 | Length: 700 bp (924 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E374619 [] (trimmed)
AAAGCATGGATGAGAATACTGCTGAAGTGAACTCTAAGGAGGACTCTTCTCCTTCAAAGGCAGAAGTTCAGTCACGGCCCTGCAATGCAGAAGAT
TTTGCTACATGGCAACGAATAATTCGGCTTGATGCAGTTCGTGCTAACGCTGAATGGATAGCATACTCCCCATCTCAAGCTGTTGTATCAGAAAG
CAGGGCACACCGTTTTGCAGAGGCTGTTGGGTTGAAGGACTATGAACACCTAGAGCCCCCTAGGATCCTACATGCTGCTCGGCTAGTCTCCATTC
TTGAAGCCTATGCGCTATATGACCCTGAAATTGGTTATTGCCAGGGGATGAGCGATTTGCTGTCACCCATAATTTCTGTAATGACAGAGGACCAT
GAAGCTTTTTGGTGCTTTGTTGGTTTCATGACGAAGGCTAGGCATAACTTCAGGCTTGATGAGGTTGGAATCAGGAGGCAGCTGAACATTATTTC
TAAGATCATCAAACAAAAGGATTCACATCTCTATCGACACTTGGAGAAGCTCCAAGCAGAGGATTGCTTTTTTGTGTACAGAATGGTGGTAGTTC
TTTTCAGGCGGGAATTATCTTTTGAGCAAACGCTCTGCCTATGGGAAGTAATGTGGGCAGACCAGGCTGCTATTAGGGCTGGGATTGGCAAGTCT
GCCTGGAGTANGATTAGGCTGCGTGCCCCACCAAC
TTTGCTACATGGCAACGAATAATTCGGCTTGATGCAGTTCGTGCTAACGCTGAATGGATAGCATACTCCCCATCTCAAGCTGTTGTATCAGAAAG
CAGGGCACACCGTTTTGCAGAGGCTGTTGGGTTGAAGGACTATGAACACCTAGAGCCCCCTAGGATCCTACATGCTGCTCGGCTAGTCTCCATTC
TTGAAGCCTATGCGCTATATGACCCTGAAATTGGTTATTGCCAGGGGATGAGCGATTTGCTGTCACCCATAATTTCTGTAATGACAGAGGACCAT
GAAGCTTTTTGGTGCTTTGTTGGTTTCATGACGAAGGCTAGGCATAACTTCAGGCTTGATGAGGTTGGAATCAGGAGGCAGCTGAACATTATTTC
TAAGATCATCAAACAAAAGGATTCACATCTCTATCGACACTTGGAGAAGCTCCAAGCAGAGGATTGCTTTTTTGTGTACAGAATGGTGGTAGTTC
TTTTCAGGCGGGAATTATCTTTTGAGCAAACGCTCTGCCTATGGGAAGTAATGTGGGCAGACCAGGCTGCTATTAGGGCTGGGATTGGCAAGTCT
GCCTGGAGTANGATTAGGCTGCGTGCCCCACCAAC
Unigenes |
Current Unigene builds | |||||
[SGN-E374619] | SGN-U567837 | Tomato 200607 | Build 2 | 21 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T188849 [Download][View] | Facility Assigned ID: FA0AAD3CB04RM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.981 | Expected Error Rate: 0.0049 | Quality Trim Threshold: 14.5 |