EST details — SGN-E374787

Search information 
Request: 374787Match: SGN-E374787
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C172794Clone name: TUS-14-H8
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C172794 is on microarray TOM1 spot ID 1-1-1.4.20.2 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C10957 [cLEC-6-L7] Trace: SGN-T24185 EST: SGN-E202524 Direction: 5' Facility: TIGR
Clone: SGN-C172794 [TUS-14-H8] Trace: SGN-T188096 EST: SGN-E374788 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E374787Length: 647 bp (913 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E374787 [] (trimmed) AGATGGTAACTGCAAAACCTAATTAGAGTCTCGTAATGTTTTACATATACACCCACAAAGAAGAAAGAAAATAGTACAAGATTACTTGCAAAATT
GAGTAAAATAGCAAGAACACGACCCGACAGATGATATCATCTGAAAAAACACGAGACAAACAAACGAAAAAGAGAAAGAACTAGTGTGTTTTTGA
ACTGATTCAAGTGGAAGAAACAAGTTAACAAGATTTGCAGCTCTTTCTACAGCTTCCTGGGAGGTCTGTACTTCCAACCATATATTCTGGGTTCT
TGGTGCATTCCCCAAGTGCAGCCCATCTCTCACAATTCTCGTTATGATCAGCACAATGTCCTCCTTCAGAATCCACTGTTTTGTCAAATGAATCC
ACATGAATCCACTTGGTTGCTGACCACTTCTCACCCTCCATAACAGGGCATCCACCGTGGAGGCTCATAGGATCAGGTACAGCATTTGGATGGAG
ACTGAAAAAAAGAAGTGCATCTCCTTTTCGTGGTTTAACAGCAATACCCCTCTTTGCACACTCGGACAAACTGTCGTCAGCTGCCATTGACCTAC
GCCGAGTTGATACCTCTGCTTCGGGGAAAACAGTTTCACCACCTTTCTCTACATCACTGAGATACATGAGTACAGTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E374787] SGN-U566163 Tomato 200607 Build 2 27 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T188095 [Download][View] Facility Assigned ID: FA0AAD2DD04FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.962 Expected Error Rate: 0.0031 Quality Trim Threshold: 14.5