EST details — SGN-E374789

Search information 
Request: 374789Match: SGN-E374789
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C172836Clone name: TUS-14-J2
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C172836 is on microarray TOM1 spot ID 1-1-7.2.20.3 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C11020 [cLEC-6-O6] Trace: SGN-T24150 EST: SGN-E202489 Direction: 5' Facility: TIGR
Clone: SGN-C172836 [TUS-14-J2] Trace: SGN-T188098 EST: SGN-E374790 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E374789Length: 713 bp (890 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E374789 [] (trimmed) GATTTGTCAAACTGAATTTTTCAAAGAACTTACATGTGGAACATTGTTGATCTCAATAATTACTGTTTACTAACTACATTCAACTCTTTATTTGC
TCCACAGAGAGGCTTCTGGCATAGTAGAAGCCAGCAGATTACTAACAAGAGCACTGGCAAGCTTCTTTACATAGGTAGAAACCAAGTAAAGGTAC
TATAATACATCAGGGTATTTATAAAGCATAATTTTCTGAAAGCTGTGCAAATGGAAAACAAAGATATCATTACACTATAAAATATGCCCCGAGAC
AAAATGTAACCATAACGTTGATACTGATTCTCCTGAGAGTTTCTTCCAGTCCCAGTAGCATCCTAGAAATCTATGGCTATTGAAGCAGAAAAGAA
AAGACAATTAACAGCAGCATGATGTAAATTTCATAGAGTAAGCAGCTGCTGCAGACGTTTCAGTCTACGGGAGAAGATCTTCACTCTCTGATGAA
GCTGCTTTCTTTCCATCATACCGCTGCTTCCCAAAAGAGAATGGCAGATATTTATATTTCAACATGTGTCGTATTTGTCTTCTCATTGTAAGTGT
GAACAGCACAACCCAATAGAAAACGAGAATCGGCCAAAATACAGGCACATCCAATACACTGAAAAATGTTAACACAAATGCAATGCAGAACGCCT
TGGTAATTGAGTACCAGAATTTGAATTCAGGAAGGCGACGAACGAAAG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E374789] SGN-U585232 Tomato 200607 Build 2 17 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T188097 [Download][View] Facility Assigned ID: FA0AAD2DE01FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.966 Expected Error Rate: 0.0044 Quality Trim Threshold: 14.5