EST details — SGN-E374811

Search information 
Request: 374811Match: SGN-E374811
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C172944Clone name: TUS-14-N14
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C172944 is on microarray TOM1 spot ID 1-1-3.2.20.8 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C14338 [cLEC-7-J23] Trace: SGN-T25312 EST: SGN-E202030 Direction: 5' Facility: TIGR
Clone: SGN-C172944 [TUS-14-N14] Trace: SGN-T188120 EST: SGN-E374812 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E374811Length: 693 bp (901 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E374811 [] (trimmed) TGAATGTTTACATAGTTCATCACGAACTCTCCAATAATGTTCACACACCGTATCAGGTCTTAAAAAAAAGCACTATTTTTGAAGGACGCAACATA
CAATTGTCGACATTTTGAAGAGTCTGAACAAGGTAGTTTAATTTAGTCCCATATCATGACAACAGCAATCACCCCAACACCTAGAAGGACAGCAA
CAAACTTGAAGAATTGAGTATCAAAATAACATTTATTTTGTGGTTTAAACCCTTTTGCAATTAGGTGATTAATTGCCACATAAATAAAAACCCCA
CAAGCAATTGCCATTGAAATAGCATAAGTCCAATCAGCTGTACGGCCTTCACTAGTAGCATCAATTGCAATTCCTATACCCACACCTATAGGGCT
TGAAATTGCAAAGGCAAAAGAGTAAGCACAAGTAAGTAGAAATGGCCTTTTTGGTATCATTCTTAAAAGTGCAATTCCCATTGCAATGGCTGCAA
ATATTTTGTGCAATGAAATTGTCCATAGGTTTCTCCATGCCTCTCCCTTTGAAGCTGATACTCCAACAGCAATGCCTTCAAAAATAGAGTGGAAA
CACAATGCAAGAATGAGAAGTATTGTATCCCCAAGTGAAGTTGTCTTTAGAAATGGATTTGTTCCATGTCCCTCATCAATATTAGTTGACCTTCC
TTCTTTATCCACTTCAACTTTGGACTCA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E374811] SGN-U567009 Tomato 200607 Build 2 7 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T188119 [Download][View] Facility Assigned ID: FA0AAD2DG07FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.943 Expected Error Rate: 0.0053 Quality Trim Threshold: 14.5