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EST details — SGN-E374829

Search information 
Request: 374829Match: SGN-E374829
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C173017Clone name: TUS-15-A15
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C173017 is on microarray TOM1 spot ID 1-1-2.1.20.17 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C1188 [cLEC-11-D23] Trace: SGN-T25726 EST: SGN-E201779 Direction: 5' Facility: TIGR
Clone: SGN-C173017 [TUS-15-A15] Trace: SGN-T188474 EST: SGN-E374830 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E374829Length: 720 bp (896 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E374829 [] (trimmed) GAAAAAAAGGCAACCATGCTATTGCACTATCTTCAGAAAATGAGGCTGCGGAATGTCATAAAGAAGGTACAATTGCTAAGTGGATAATTACAAAT
TTCCAACTGTTCTTTAACATTTCCAGTCGAGGGAATTGGAGTCCTGGAATTCAAACTGGCATATGAAGTAGATAAAATATTTTTTGTTTTCAATA
TATGATAACAAGTTCAACACACAGAAGATGGAGGAGGATTTCTAGTTTTTATGAGGTAGGATTTGGCAAAACTTTTGGCTTTGGCTTCACTTCAA
CTTCATTTACACTGCGGACAAATATGGCATCCGGCTCATGAGGCTTTTCTCCCTCTTCAAATGTATAACTTGATGCTACAGCCAAGAGTTTACCA
TCTCTGCTAAATGACAACGCGGCAACGCTTGAAGGATACTTAGGGTACTGATACAGCCTCTTTTTGTTGTTACCATCCCAGACATTAACATAACC
ATCACAACCACCAGTGGCGAAAGTACCATAGATAGGGTGAAATGCAATTGCATTTACAGGGTACACGATATCTCTTCCAGCTTCAGATTTCCGAT
GACATTTAAATGCATATTTCTTCGATTGACCGGACTCAGAAAGATCAAAAAATTCCATTGCAACCCGACCTTCAACTGAACTTAGAGCATAGCCT
GTTCCATTAGGATAACACCGCACACATCTAGTTTGATACTTCAAGGATGATTCCC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E374829] SGN-U566042 Tomato 200607 Build 2 16 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T188473 [Download][View] Facility Assigned ID: FA0AAD3AA08FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.972 Expected Error Rate: 0.0046 Quality Trim Threshold: 14.5