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EST details — SGN-E374892

Search information 
Request: 374892Match: SGN-E374892
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C173355Clone name: TUS-15-O17
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C173355 is on microarray TOM1 spot ID 1-1-8.3.19.3 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C2116 [cLEC-14-N4] Trace: SGN-T26527 EST: SGN-E204911 Direction: 5' Facility: TIGR
Clone: SGN-C173355 [TUS-15-O17] Trace: SGN-T188535 EST: SGN-E374891 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E374892Length: 594 bp (883 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E374892 [] (trimmed) TCAGGAGCACTGCTCTGTCAACTATACAAATGTCATCACGGTTGTTTTACTCGAAGTCGATGAATATAACAAGACATTAAGAAAAAAATACAGAC
TGGACAAAACTCGATCACTATAAACGGAGTCTATATTGCTGATGCTGCTTCAGTGAAATATATAGATGTTGTCAAAACTCAACAGTGGAAAGATC
GAAATAAGTAGAGCGAGCGAGCATATCTCCTGAGAACTGTTAACCAACATTCTACTCGGCTTACAGCAAGCCAGCTATCTTCAGAGCATTTTCGA
AATCTTCTTCATTACTCCATGAGGGAATCTCAGCCACTTGATGGTTGAAATGGTTCTCAATCTTTGACATTAGCATGTTGTCTCTGTCACTGCAC
AGCAAGTTGAATATCGCACCCTTGCGTCCAAAACGTCCTGCTCTACCAATCCGATGCAGGTATACCTCATGATCTGGCTCTGTTGGACTCTCGTG
TCTCACAGGGAGGTCATAATTAACCACCAAATTAACCTGTGATTGGTCAAATCCACGAGCAAGAAGATCAGTTGATATAAGAATTTGTGTCAATC
CATCTTTGAACTCCTTGATTATTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E374892] SGN-U586037 Tomato 200607 Build 2 67 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T188536 [Download][View] Facility Assigned ID: FA0AAD3AH09RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: Multiple cloning site sequence detected -- chimeric clone suspected.
Passed all screens and filters
Sequence Entropy: 0.000 Expected Error Rate: 0.0000 Quality Trim Threshold: 0