EST details — SGN-E374996
Search information |
Request: 374996 | Match: SGN-E374996 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C181175 | Clone name: TUS-36-E13 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C181175 is on microarray TOM1 spot ID 1-1-4.1.15.21 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C23135 [cLED-4-J19] | Trace: SGN-T49483 | EST: SGN-E231714 | Direction: 5' | Facility: TIGR |
Sequence |
Sequence Id: SGN-E374996 | Length: 436 bp (919 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E374996 [] (trimmed)
CAGGCATAAGTGTGGCAGCATTAGGAAGGCACTTGAAGTGTTTCAAGGCATGATAGAGAAGGACGTGTCGTCTTGGAACATAATTATATTAGGAT
TAGCTTTCCATGGTCATTCTGAAGAATGTATCTCTCTTTTTGAAGATATGAGGAGAATGAAGTATATCCCTAATGAAATTACTTTTGTTGGTGTA
TTCCTTGCTTGTAGTCACGCTGGTAAAGTTGATGATGGTCGAGAATATTTCAGCATGATGAGAACTGACTACAATATTGAGACAAACATAAGGCA
CTATGGTTGTATGGTGGATATGCTAGCGCGTGCAGGACTATTGAATGAAGCGTTTGAGTTCATATACACGATGGACATTAAACCTAATGCTATTA
TATGGAGAACACTGTTATGAGCTTGTAAAGTACATTCCCTTGGTAAGCAGGGAAGG
TAGCTTTCCATGGTCATTCTGAAGAATGTATCTCTCTTTTTGAAGATATGAGGAGAATGAAGTATATCCCTAATGAAATTACTTTTGTTGGTGTA
TTCCTTGCTTGTAGTCACGCTGGTAAAGTTGATGATGGTCGAGAATATTTCAGCATGATGAGAACTGACTACAATATTGAGACAAACATAAGGCA
CTATGGTTGTATGGTGGATATGCTAGCGCGTGCAGGACTATTGAATGAAGCGTTTGAGTTCATATACACGATGGACATTAAACCTAATGCTATTA
TATGGAGAACACTGTTATGAGCTTGTAAAGTACATTCCCTTGGTAAGCAGGGAAGG
Unigenes |
Current Unigene builds | |||||
[SGN-E374996] | SGN-U562739 | Tomato 200607 | Build 2 | 4 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T187554 [Download][View] | Facility Assigned ID: FA0AAD24AC07RM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.961 | Expected Error Rate: 0.0145 | Quality Trim Threshold: 14.5 |