EST details — SGN-E375050

Search information 
Request: 375050Match: SGN-E375050
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C181069Clone name: TUS-36-A3
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C181069 is on microarray TOM1 spot ID 1-1-6.1.15.16 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C17601 [cLED-1-H10] Trace: SGN-T48630 EST: SGN-E227118 Direction: 5' Facility: TIGR
Clone: SGN-C17601 [cLED-1-H10] Trace: SGN-T48631 EST: SGN-E227119 Direction: 3' Facility: TIGR
Clone: SGN-C181069 [TUS-36-A3] Trace: SGN-T1667 EST: SGN-E378587 Direction: 5' Facility: Giov. Lab
Clone: SGN-C181069 [TUS-36-A3] Trace: SGN-T187609 EST: SGN-E375051 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E375050Length: 698 bp (859 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E375050 [] (trimmed) ACAAGAAGTTCTCTTGATTACAAGCCATTCATAGAATATTTACATATTGAGCTAAAGATAGAGCCACTGAAAATAAGCATTGCTCCATGAATTGT
TGAAGAACAAAGATCCTAACACTCCCCAGAATGCAACAATGAACCCTAACGCCATCGATATATAAAACTCTCTTGATAGAAACTCATCATCATCA
TCATCATTTTCTTGAAAACTACTGTCATGACCAACATGAAGATTTGGAGGAGCAAATGAAGGACACTCTGGAAGAGGAGGGCCACATAGCTGAAT
ATTCCCTTCATAGGTTGAGGAGTCGAAGCCTTGCAATTGAGTGCTCGATGGTATTCTCCCTGACAAGTTGTTGTTTGACAAATCCAACACGCTAA
GAAACGTCAGGTTAGCGAGCCCTACTGAGATCTTCCCCGAGAGATGGTTCCTCGACAAGTCAAGAGACTCCAACATCTTCATTAAACCAATTCCT
TCAATGATACTTCCCGACAAATTGTTCCTTGATAGGTTCAATGACAGCAATGCATTCATTCTGCTAAAATCATTTGGGATGTCACCGACTAGTTC
GTTGCTAGACAGATCGATGGTTTTCAGAAGCCACAAGATGTTACGATACTCTGACTCCTTGTTTTTCCATTGGACTAATGCATTGCCATGGTACA
GTGTACCTACTCGAGGGGGTGATGGATCGAAGT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E375050] SGN-U562726 Tomato 200607 Build 2 5 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T187608 [Download][View] Facility Assigned ID: FA0AAD24AA02FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.971 Expected Error Rate: 0.0048 Quality Trim Threshold: 14.5