EST details — SGN-E375108
Search information |
Request: 375108 | Match: SGN-E375108 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C181325 | Clone name: TUS-36-K19 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C181325 is on microarray TOM1 spot ID 1-1-6.3.14.5 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C23864 [cLED-6-I6] | Trace: SGN-T50142 | EST: SGN-E233156 | Direction: 5' | Facility: TIGR |
Clone: SGN-C181325 [TUS-36-K19] | Trace: SGN-T187667 | EST: SGN-E375109 | Direction: 5' | Facility: INRA |
Sequence |
Sequence Id: SGN-E375108 | Length: 377 bp (884 bp untrimmed) |
Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E375108 [] (trimmed)
AATATATGATTGGTATATGGGGGGGTCAACCTTACTTATATAGCATAAGGAAGTCAACGACTAAATACAATTGATTTGTTCTTATTTTTAAGTAT
ATATTCTTATTTCAAACTGGTTGATTTGTTCTATTAAAATACAGATTCATAGTCAACTTCTTTTCTTTACAATATGCAAATAAAAGCTATCTAAA
TAAAGAAACTGCACGATGTAAACTTCAACGGATTCATATATATTACAGTTAGAACAGAAGCTATCAGCATACGGACTCGAGGCACGGATTTCATG
CTTAAATATAGGGCATTTCTTATTGGTTTTTCTCAGAAACCATAAAAACAATAGCCCTAGCCTTATTTACTTGAAATATCGGTTAATATGGG
ATATTCTTATTTCAAACTGGTTGATTTGTTCTATTAAAATACAGATTCATAGTCAACTTCTTTTCTTTACAATATGCAAATAAAAGCTATCTAAA
TAAAGAAACTGCACGATGTAAACTTCAACGGATTCATATATATTACAGTTAGAACAGAAGCTATCAGCATACGGACTCGAGGCACGGATTTCATG
CTTAAATATAGGGCATTTCTTATTGGTTTTTCTCAGAAACCATAAAAACAATAGCCCTAGCCTTATTTACTTGAAATATCGGTTAATATGGG
Unigenes |
Current Unigene builds | |||||
[SGN-E375108] | SGN-U575454 | Tomato 200607 | Build 2 | 2 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T187666 [Download][View] | Facility Assigned ID: FA0AAD24AF10FM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.913 | Expected Error Rate: 0.0136 | Quality Trim Threshold: 14.5 |